Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1612

Experiment: Lactitol 10mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactitol 10mM (C)
1,853,823	+		Echvi_1610	0.73	-0.1
1,853,824	-		Echvi_1610	0.73	-1.1
1,853,921	+		Echvi_1610	0.77	+1.4
1,853,921	+		Echvi_1610	0.77	-0.5
1,853,921	+		Echvi_1610	0.77	-0.9
1,853,922	-		Echvi_1610	0.77	-1.3
1,854,049	+		Echvi_1610	0.82	-2.4
1,854,110	+		Echvi_1610	0.85	-0.2
1,854,111	-		Echvi_1610	0.85	-0.7
1,854,111	-		Echvi_1610	0.85	+1.4
1,854,111	-		Echvi_1610	0.85	-1.2
1,854,112	+		Echvi_1610	0.85	+0.2
1,854,112	+		Echvi_1610	0.85	-0.9
1,854,112	+		Echvi_1610	0.85	+0.5
1,854,112	+		Echvi_1610	0.85	-1.1
1,854,112	+		Echvi_1610	0.85	+1.5
1,854,112	+		Echvi_1610	0.85	-0.7
1,854,113	-		Echvi_1610	0.85	-0.8
1,854,113	-		Echvi_1610	0.85	-0.3
1,854,115	-		Echvi_1610	0.85	+0.5
1,854,141	+		Echvi_1610	0.86	+1.0
1,854,141	+		Echvi_1610	0.86	-2.2
1,854,141	+		Echvi_1610	0.86	-1.0
1,854,142	-		Echvi_1610	0.86	-1.1
1,854,199	-		Echvi_1610	0.88	+0.2
1,854,260	+				-0.0
1,854,284	+				-1.1
1,854,316	+				-1.7
1,854,316	+				-0.5
1,854,316	+				+0.1
1,854,317	-				-1.5
1,854,317	-				-0.6
1,854,317	-				-0.2
1,854,317	-				+2.5
1,854,320	+				-2.9
1,854,321	-				-2.5
1,854,321	-				-0.2
1,854,335	-				-0.1
1,854,357	-				-1.4
1,854,359	+				-1.1
1,854,359	+				+0.1
1,854,359	+				+3.3
1,854,360	-				-1.3
1,854,360	-				+0.2
1,854,360	-				-0.1
1,854,360	-				-1.5
1,854,360	-				-2.3
1,854,362	-				-0.4
1,854,424	+				-1.3
1,854,425	-				-0.1
1,854,425	-				-1.4
1,854,425	-				+0.7
1,854,507	-				-0.8
1,854,608	+				-0.2
1,854,672	-		Echvi_1611	0.17	+0.3
1,854,672	-		Echvi_1611	0.17	+0.4
1,854,691	+		Echvi_1611	0.28	+0.2
1,854,691	+		Echvi_1611	0.28	-0.1
1,854,691	+		Echvi_1611	0.28	-2.8
1,854,692	-		Echvi_1611	0.28	-0.8
1,854,692	-		Echvi_1611	0.28	+1.4
1,854,722	+		Echvi_1611	0.45	+0.0
1,854,723	-		Echvi_1611	0.46	-0.5
1,854,729	-		Echvi_1611	0.49	-0.2
1,854,729	-		Echvi_1611	0.49	-1.1
1,854,837	-				+0.2
1,854,868	+				+0.7
1,854,868	+				-0.1
1,854,869	-				-0.5
1,854,869	-				+0.1
1,854,869	-				-0.2
1,854,869	-				-0.8
1,854,941	+		Echvi_1612	0.14	+0.9
1,855,056	+		Echvi_1612	0.27	+1.8
1,855,056	+		Echvi_1612	0.27	+0.4
1,855,056	+		Echvi_1612	0.27	-1.4
1,855,056	+		Echvi_1612	0.27	+0.3
1,855,056	+		Echvi_1612	0.27	+1.5
1,855,057	-		Echvi_1612	0.27	+0.7
1,855,057	-		Echvi_1612	0.27	+3.1
1,855,057	-		Echvi_1612	0.27	+3.1
1,855,089	+		Echvi_1612	0.31	+1.2
1,855,090	-		Echvi_1612	0.31	+0.5
1,855,090	-		Echvi_1612	0.31	+3.1
1,855,090	-		Echvi_1612	0.31	-1.5
1,855,095	+		Echvi_1612	0.31	+2.1
1,855,134	+		Echvi_1612	0.36	+0.3
1,855,134	+		Echvi_1612	0.36	+1.9
1,855,134	+		Echvi_1612	0.36	-0.4
1,855,134	+		Echvi_1612	0.36	-0.4
1,855,134	+		Echvi_1612	0.36	+0.2
1,855,134	+		Echvi_1612	0.36	-0.5
1,855,135	-		Echvi_1612	0.36	+0.1
1,855,135	-		Echvi_1612	0.36	-2.0
1,855,135	-		Echvi_1612	0.36	-1.1
1,855,135	-		Echvi_1612	0.36	+1.1
1,855,215	-		Echvi_1612	0.45	+0.8
1,855,215	-		Echvi_1612	0.45	+0.9
1,855,248	-		Echvi_1612	0.48	+0.5
1,855,363	-		Echvi_1612	0.61	-0.9
1,855,363	-		Echvi_1612	0.61	+0.8
1,855,363	-		Echvi_1612	0.61	-0.5
1,855,384	+		Echvi_1612	0.63	+0.4
1,855,415	+		Echvi_1612	0.67	+1.3
1,855,415	+		Echvi_1612	0.67	-0.7
1,855,415	+		Echvi_1612	0.67	+1.5
1,855,415	+		Echvi_1612	0.67	+0.4
1,855,416	-		Echvi_1612	0.67	-0.1
1,855,416	-		Echvi_1612	0.67	+1.5
1,855,416	-		Echvi_1612	0.67	-1.3
1,855,416	-		Echvi_1612	0.67	+1.0
1,855,416	-		Echvi_1612	0.67	+1.5
1,855,438	+		Echvi_1612	0.69	+0.1
1,855,439	-		Echvi_1612	0.70	-0.1
1,855,447	+		Echvi_1612	0.70	+0.4
1,855,661	-				+0.4
1,855,661	-				-0.6
1,855,661	-				-0.5
1,855,730	-				+0.2
1,855,764	+				-1.4
1,855,775	+				+0.4
1,855,778	+				-1.1
1,855,778	+				-0.3
1,855,779	-				+1.7
1,855,827	+				+2.1
1,855,828	-				-2.6
1,855,834	+				+0.2
1,855,873	+				-0.0
1,855,874	-				-1.3
1,855,874	-				+0.1
1,855,943	+				-0.5
1,855,947	+				-0.5
1,855,947	+				+0.9
1,855,947	+				+1.7
1,855,947	+				-0.0
1,855,947	+				-0.5
1,855,947	+				+2.0
1,855,948	-				+0.3
1,855,948	-				-0.4
1,855,948	-				+0.4
1,855,980	+				+0.2
1,855,981	-				-0.4
1,855,981	-				-0.5
1,856,015	+				-0.7
1,856,015	+				-0.8
1,856,016	-				-0.2
1,856,016	-				+0.6
1,856,020	+				-0.7
1,856,020	+				+0.5
1,856,020	+				+0.2
1,856,020	+				-1.1
1,856,021	-				+0.3
1,856,021	-				-0.4
1,856,021	-				-1.1
1,856,021	-				+1.3
1,856,022	+				-0.2
1,856,022	+				-1.3
1,856,022	+				-0.7
1,856,022	+				-0.4
1,856,022	+				-0.6
1,856,022	+				+1.3
1,856,023	-				-1.0
1,856,023	-				-0.2
1,856,023	-				-1.0
1,856,023	-				+0.3
1,856,027	+				-1.2
1,856,027	+				-0.3
1,856,053	-				+0.3
1,856,132	+		Echvi_1613	0.14	-0.6
1,856,132	+		Echvi_1613	0.14	-1.1
1,856,132	+		Echvi_1613	0.14	-1.3
1,856,132	+		Echvi_1613	0.14	-1.4
1,856,132	+		Echvi_1613	0.14	-1.2
1,856,133	-		Echvi_1613	0.14	-0.8
1,856,133	-		Echvi_1613	0.14	-0.7
1,856,133	-		Echvi_1613	0.14	-0.2
1,856,133	-		Echvi_1613	0.14	+2.1
1,856,134	+		Echvi_1613	0.14	-0.8
1,856,134	+		Echvi_1613	0.14	-0.5
1,856,134	+		Echvi_1613	0.14	+0.4
1,856,134	+		Echvi_1613	0.14	-0.2
1,856,134	+		Echvi_1613	0.14	-0.5
1,856,135	-		Echvi_1613	0.14	-2.4
1,856,135	-		Echvi_1613	0.14	-3.2
1,856,135	-		Echvi_1613	0.14	+3.1
1,856,157	-		Echvi_1613	0.16	+0.5
1,856,172	-		Echvi_1613	0.17	+0.5
1,856,188	-		Echvi_1613	0.18	+0.5
1,856,191	+		Echvi_1613	0.19	-0.1
1,856,192	-		Echvi_1613	0.19	+0.2
1,856,217	+		Echvi_1613	0.21	-0.3
1,856,421	+		Echvi_1613	0.36	-1.2
1,856,551	+		Echvi_1613	0.46	+1.9
1,856,551	+		Echvi_1613	0.46	-0.1
1,856,552	-		Echvi_1613	0.46	+0.3
1,856,552	-		Echvi_1613	0.46	+0.2
1,856,636	+		Echvi_1613	0.53	+0.2
1,856,636	+		Echvi_1613	0.53	+0.9
1,856,637	-		Echvi_1613	0.53	-0.7
1,856,640	+		Echvi_1613	0.53	-2.6
1,856,642	+		Echvi_1613	0.53	-0.1