Strain Fitness in Escherichia coli BW25113 around b3693

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,870,755	+	dgoD	b4478	0.77	+1.1
3,870,755	+	dgoD	b4478	0.77	+0.9
3,870,758	-	dgoD	b4478	0.77	-1.2
3,870,826	-	dgoD	b4478	0.83	-0.5
3,870,826	-	dgoD	b4478	0.83	-0.7
3,870,826	-	dgoD	b4478	0.83	+1.4
3,870,939	-				+0.3
3,870,995	-				-0.3
3,871,028	+				-0.7
3,871,028	+				+0.6
3,871,028	+				-0.7
3,871,036	-				-0.0
3,871,040	+				+2.2
3,871,040	+				-2.8
3,871,177	+	dgoA	b4477	0.26	-1.4
3,871,321	+	dgoA	b4477	0.49	+0.4
3,871,321	+	dgoA	b4477	0.49	-1.9
3,871,332	+	dgoA	b4477	0.51	+1.4
3,871,332	+	dgoA	b4477	0.51	-1.8
3,871,342	-	dgoA	b4477	0.52	-0.7
3,871,352	-	dgoA	b4477	0.54	-0.1
3,871,352	-	dgoA	b4477	0.54	-0.9
3,871,359	-	dgoA	b4477	0.55	+1.7
3,871,586	-				-2.0
3,871,592	-				+1.0
3,871,645	+				-1.5
3,871,646	+				+2.2
3,871,664	-				-2.8
3,871,738	+	dgoK	b3693	0.14	-0.1
3,871,761	-	dgoK	b3693	0.16	+0.5
3,871,762	+	dgoK	b3693	0.16	-2.2
3,871,763	-	dgoK	b3693	0.16	-0.6
3,871,763	-	dgoK	b3693	0.16	-0.1
3,871,774	-	dgoK	b3693	0.18	-1.1
3,871,774	-	dgoK	b3693	0.18	-1.3
3,871,784	-	dgoK	b3693	0.19	+0.6
3,871,784	-	dgoK	b3693	0.19	-0.8
3,871,799	-	dgoK	b3693	0.20	-1.5
3,871,825	-	dgoK	b3693	0.23	+0.1
3,871,835	+	dgoK	b3693	0.25	+1.2
3,871,835	+	dgoK	b3693	0.25	-0.4
3,871,848	-	dgoK	b3693	0.26	-0.5
3,871,848	-	dgoK	b3693	0.26	-0.3
3,871,917	-	dgoK	b3693	0.34	+0.5
3,871,940	-	dgoK	b3693	0.37	+0.2
3,872,090	+	dgoK	b3693	0.54	-0.3
3,872,106	-	dgoK	b3693	0.55	-2.2
3,872,162	-	dgoK	b3693	0.62	+1.1
3,872,162	-	dgoK	b3693	0.62	-0.5
3,872,175	-	dgoK	b3693	0.63	+0.1
3,872,175	-	dgoK	b3693	0.63	-0.9
3,872,219	+	dgoK	b3693	0.68	+1.5
3,872,342	-	dgoK	b3693	0.82	-1.0
3,872,343	+	dgoK	b3693	0.82	-0.7
3,872,353	+	dgoK	b3693	0.84	+0.3
3,872,353	+	dgoK	b3693	0.84	-1.0
3,872,362	-	dgoK	b3693	0.85	+0.3
3,872,422	-				-0.3
3,872,437	+				+0.6
3,872,464	+				-1.4
3,872,496	-				-2.0
3,872,496	-				-1.3
3,872,520	-				-0.3
3,872,520	-				-0.8
3,872,603	-	dgoR	b4479	0.16	-1.0
3,872,621	-	dgoR	b4479	0.18	+1.6
3,872,639	+	dgoR	b4479	0.21	-0.9
3,872,639	+	dgoR	b4479	0.21	-2.4
3,872,717	+	dgoR	b4479	0.32	+0.2
3,872,727	-	dgoR	b4479	0.34	-0.5
3,872,770	+	dgoR	b4479	0.40	-0.8
3,872,812	-	dgoR	b4479	0.46	+1.2
3,872,841	+	dgoR	b4479	0.50	-1.3
3,872,948	+	dgoR	b4479	0.66	-1.6
3,872,948	+	dgoR	b4479	0.66	+0.6
3,872,968	+	dgoR	b4479	0.69	-0.5
3,872,976	+	dgoR	b4479	0.70	-1.2
3,872,986	-	dgoR	b4479	0.71	+0.3
3,872,986	-	dgoR	b4479	0.71	+1.0
3,873,066	-	dgoR	b4479	0.83	-0.7
3,873,179	+				+0.9
3,873,190	+				-0.9
3,873,198	-				+1.7
3,873,209	-				+1.0
3,873,209	-				-1.9
3,873,249	+				+2.0
3,873,285	+				+0.5
3,873,285	+				+0.8
3,873,285	-				+1.6
3,873,393	-				-0.6
3,873,400	+				-0.5
3,873,408	-				-2.0
3,873,408	-				-0.0
3,873,433	+				+0.2