Strain Fitness in Escherichia coli BW25113 around b3453

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,588,047	-				+0.2
3,588,047	-				-0.6
3,588,067	+				+1.3
3,588,238	+	ugpA	b3452	0.22	-2.2
3,588,238	+	ugpA	b3452	0.22	-2.7
3,588,254	-	ugpA	b3452	0.23	+0.7
3,588,269	+	ugpA	b3452	0.25	+1.7
3,588,288	+	ugpA	b3452	0.27	-2.3
3,588,288	+	ugpA	b3452	0.27	-0.3
3,588,291	-	ugpA	b3452	0.27	+0.0
3,588,291	-	ugpA	b3452	0.27	-1.0
3,588,399	+	ugpA	b3452	0.40	-2.2
3,588,404	+	ugpA	b3452	0.40	-0.3
3,588,443	+	ugpA	b3452	0.45	+0.8
3,588,443	+	ugpA	b3452	0.45	+1.0
3,588,540	+	ugpA	b3452	0.56	+0.9
3,588,540	+	ugpA	b3452	0.56	+0.7
3,588,548	-	ugpA	b3452	0.56	+0.8
3,588,588	+	ugpA	b3452	0.61	-2.7
3,588,588	+	ugpA	b3452	0.61	-1.2
3,588,608	+	ugpA	b3452	0.63	+0.4
3,588,638	+	ugpA	b3452	0.67	-1.6
3,588,638	+	ugpA	b3452	0.67	-2.7
3,588,647	-	ugpA	b3452	0.68	-1.7
3,588,647	-	ugpA	b3452	0.68	-1.5
3,588,662	-	ugpA	b3452	0.69	+0.2
3,588,662	-	ugpA	b3452	0.69	+0.6
3,588,667	-	ugpA	b3452	0.70	-0.7
3,588,695	-	ugpA	b3452	0.73	+1.3
3,588,996	+				-0.7
3,589,030	+				+0.8
3,589,109	-				+0.1
3,589,109	-				+0.2
3,589,121	-				+1.6
3,589,121	-				+0.2
3,589,134	+				+1.1
3,589,134	+				-1.6
3,589,259	+	ugpB	b3453	0.17	+1.0
3,589,259	+	ugpB	b3453	0.17	+2.0
3,589,282	+	ugpB	b3453	0.19	-0.1
3,589,286	-	ugpB	b3453	0.19	-1.1
3,589,292	-	ugpB	b3453	0.20	-2.7
3,589,292	-	ugpB	b3453	0.20	-0.4
3,589,307	+	ugpB	b3453	0.21	-2.2
3,589,307	+	ugpB	b3453	0.21	-1.6
3,589,415	+	ugpB	b3453	0.29	-0.4
3,589,415	+	ugpB	b3453	0.29	+0.6
3,589,417	-	ugpB	b3453	0.29	-0.9
3,589,417	-	ugpB	b3453	0.29	-0.6
3,589,471	+	ugpB	b3453	0.33	-0.3
3,589,471	+	ugpB	b3453	0.33	+0.1
3,589,484	+	ugpB	b3453	0.34	+2.2
3,589,484	+	ugpB	b3453	0.34	-2.6
3,589,487	-	ugpB	b3453	0.35	+1.1
3,589,540	-	ugpB	b3453	0.39	-0.7
3,589,583	-	ugpB	b3453	0.42	+0.3
3,589,583	-	ugpB	b3453	0.42	-2.0
3,589,629	-	ugpB	b3453	0.45	+0.3
3,589,634	+	ugpB	b3453	0.46	-1.7
3,589,674	-	ugpB	b3453	0.49	-0.8
3,589,674	-	ugpB	b3453	0.49	+0.5
3,589,677	+	ugpB	b3453	0.49	-0.5
3,589,677	+	ugpB	b3453	0.49	-1.2
3,589,685	-	ugpB	b3453	0.50	+0.2
3,589,685	-	ugpB	b3453	0.50	-2.6
3,589,777	+	ugpB	b3453	0.57	-1.4
3,589,777	+	ugpB	b3453	0.57	+0.3
3,589,998	-	ugpB	b3453	0.73	+0.0
3,589,998	-	ugpB	b3453	0.73	-0.4
3,590,230	+				+2.5
3,590,271	+				-1.9
3,590,305	+				-0.9
3,590,319	+				+0.6
3,590,390	+				+0.4
3,590,403	+				-0.0
3,590,411	-				-0.9
3,590,450	+				+0.7
3,590,459	+				-1.0
3,590,655	+				-1.7
3,590,659	-				-1.4
3,590,659	-				-0.0
3,590,703	-				-3.0
3,590,774	-				+0.6
3,590,810	-				+0.3
3,590,898	-	livF	b3454	0.21	-0.4
3,590,898	-	livF	b3454	0.21	-0.3
3,590,903	-	livF	b3454	0.22	-1.3
3,590,966	-	livF	b3454	0.31	+0.4
3,590,966	-	livF	b3454	0.31	-1.1
3,590,988	+	livF	b3454	0.34	-0.3
3,591,059	-	livF	b3454	0.44	-1.7
3,591,061	+	livF	b3454	0.44	+0.6
3,591,090	-	livF	b3454	0.48	-0.8
3,591,125	-	livF	b3454	0.53	+0.5
3,591,164	+	livF	b3454	0.58	-0.0
3,591,164	+	livF	b3454	0.58	-1.0
3,591,172	-	livF	b3454	0.60	-0.6
3,591,197	+	livF	b3454	0.63	+0.5
3,591,252	+	livF	b3454	0.71	+2.2
3,591,252	+	livF	b3454	0.71	-1.7