Strain Fitness in Escherichia coli BW25113 around b3370

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,496,942	+	cysG	b3368	0.79	-0.4
3,496,942	+	cysG	b3368	0.79	-0.1
3,496,947	+	cysG	b3368	0.80	+1.0
3,496,960	-	cysG	b3368	0.81	-1.7
3,496,981	+	cysG	b3368	0.82	+1.2
3,496,981	+	cysG	b3368	0.82	-1.8
3,496,986	+	cysG	b3368	0.83	+0.7
3,496,986	+	cysG	b3368	0.83	-0.6
3,496,986	+	cysG	b3368	0.83	-1.8
3,496,986	+	cysG	b3368	0.83	+0.6
3,496,988	+	cysG	b3368	0.83	-0.7
3,496,989	+	cysG	b3368	0.83	-1.4
3,496,989	+	cysG	b3368	0.83	+0.3
3,496,989	+	cysG	b3368	0.83	+1.5
3,496,991	+	cysG	b3368	0.83	-1.3
3,496,994	-	cysG	b3368	0.83	+0.2
3,496,994	-	cysG	b3368	0.83	+0.4
3,496,994	-	cysG	b3368	0.83	-0.3
3,496,996	+	cysG	b3368	0.83	-1.2
3,496,996	+	cysG	b3368	0.83	-2.2
3,497,012	+	cysG	b3368	0.85	+1.2
3,497,017	+	cysG	b3368	0.85	-0.3
3,497,054	+	cysG	b3368	0.88	+0.3
3,497,089	+				-2.4
3,497,097	+				-2.5
3,497,097	+				+0.6
3,497,113	+				-0.9
3,497,114	+				-1.0
3,497,114	+				+1.0
3,497,114	+				-0.1
3,497,114	+				+0.6
3,497,114	+				-0.8
3,497,114	+				-3.2
3,497,116	+				+1.8
3,497,117	+				+0.8
3,497,118	+				+0.4
3,497,124	+				+0.6
3,497,124	+				+1.6
3,497,124	+				-1.8
3,497,130	-				+1.0
3,497,136	+				-0.2
3,497,142	+				-1.5
3,497,142	+				-0.4
3,497,143	+				-3.2
3,497,143	+				+0.5
3,497,146	+				+0.5
3,497,159	+				-0.4
3,497,165	+				-1.3
3,497,172	+				-0.4
3,497,173	+				+0.4
3,497,173	+				-1.5
3,497,180	+				-2.5
3,497,180	+				+0.7
3,497,180	+				-0.2
3,497,180	+				-1.8
3,497,190	+				-0.5
3,497,192	+				+0.3
3,497,192	+				+0.2
3,497,192	+				+0.6
3,497,192	+				+0.3
3,497,192	+				-0.7
3,497,192	+				+1.1
3,497,192	+				+0.3
3,497,193	+				+0.8
3,497,205	+				+0.8
3,497,205	+				-1.8
3,497,205	+				-0.0
3,497,213	+				-0.4
3,497,454	-				-1.2
3,497,454	-				+1.6
3,497,494	+	yhfL	b3369	0.14	+1.8
3,497,497	+	yhfL	b3369	0.16	+1.0
3,497,501	+	yhfL	b3369	0.18	+0.9
3,497,501	+	yhfL	b3369	0.18	+0.8
3,497,504	-	yhfL	b3369	0.20	+0.3
3,497,504	-	yhfL	b3369	0.20	+0.9
3,497,506	+	yhfL	b3369	0.21	+1.5
3,497,506	-	yhfL	b3369	0.21	-2.9
3,497,508	+	yhfL	b3369	0.23	+1.3
3,497,508	+	yhfL	b3369	0.23	-0.9
3,497,509	-	yhfL	b3369	0.23	-2.7
3,497,509	-	yhfL	b3369	0.23	-2.3
3,497,509	-	yhfL	b3369	0.23	-1.8
3,497,511	+	yhfL	b3369	0.24	-2.6
3,497,514	-	yhfL	b3369	0.26	+0.4
3,497,514	-	yhfL	b3369	0.26	-1.2
3,497,514	-	yhfL	b3369	0.26	-1.0
3,497,514	-	yhfL	b3369	0.26	+0.3
3,497,514	-	yhfL	b3369	0.26	-0.2
3,497,514	-	yhfL	b3369	0.26	+0.4
3,497,514	-	yhfL	b3369	0.26	-1.5
3,497,514	-	yhfL	b3369	0.26	-0.1
3,497,514	-	yhfL	b3369	0.26	-1.3
3,497,516	+	yhfL	b3369	0.27	-1.4
3,497,516	+	yhfL	b3369	0.27	-0.8
3,497,518	-	yhfL	b3369	0.29	-0.4
3,497,518	-	yhfL	b3369	0.29	+0.7
3,497,518	-	yhfL	b3369	0.29	-1.5
3,497,518	-	yhfL	b3369	0.29	+0.8
3,497,519	-	yhfL	b3369	0.29	-2.5
3,497,519	-	yhfL	b3369	0.29	-0.3
3,497,519	-	yhfL	b3369	0.29	+0.5
3,497,522	+	yhfL	b3369	0.31	-1.8
3,497,522	+	yhfL	b3369	0.31	+1.7
3,497,522	+	yhfL	b3369	0.31	-2.0
3,497,524	-	yhfL	b3369	0.32	+0.9
3,497,524	-	yhfL	b3369	0.32	-0.3
3,497,524	-	yhfL	b3369	0.32	+1.7
3,497,524	-	yhfL	b3369	0.32	+0.9
3,497,524	-	yhfL	b3369	0.32	-0.5
3,497,527	-	yhfL	b3369	0.34	-1.7
3,497,527	-	yhfL	b3369	0.34	+1.5
3,497,531	-	yhfL	b3369	0.36	-0.1
3,497,531	-	yhfL	b3369	0.36	-1.6
3,497,534	-	yhfL	b3369	0.38	+0.2
3,497,534	-	yhfL	b3369	0.38	+0.8
3,497,536	-	yhfL	b3369	0.39	-3.5
3,497,538	-	yhfL	b3369	0.40	+0.7
3,497,547	-	yhfL	b3369	0.46	-0.2
3,497,556	+	yhfL	b3369	0.51	-2.3
3,497,559	-	yhfL	b3369	0.53	+1.3
3,497,562	+	yhfL	b3369	0.55	+3.4
3,497,563	+	yhfL	b3369	0.55	+1.1
3,497,563	+	yhfL	b3369	0.55	+0.6
3,497,563	+	yhfL	b3369	0.55	-3.5
3,497,567	+	yhfL	b3369	0.58	+2.0
3,497,569	-	yhfL	b3369	0.59	-0.1
3,497,571	-	yhfL	b3369	0.60	-0.8
3,497,571	-	yhfL	b3369	0.60	+0.8
3,497,571	-	yhfL	b3369	0.60	+0.1
3,497,572	-	yhfL	b3369	0.61	-0.5
3,497,575	+	yhfL	b3369	0.62	+0.3
3,497,575	+	yhfL	b3369	0.62	+1.5
3,497,580	-	yhfL	b3369	0.65	+1.9
3,497,580	-	yhfL	b3369	0.65	-1.1
3,497,580	-	yhfL	b3369	0.65	+0.1
3,497,583	-	yhfL	b3369	0.67	-0.9
3,497,619	+	yhfL	b3369	0.89	-0.3
3,497,621	+				+1.3
3,497,624	+				+0.5
3,497,627	+				-3.6
3,497,627	-				-0.8
3,497,629	+				-1.0
3,497,629	+				+0.1
3,497,629	-				-0.7
3,497,640	-				+1.8
3,497,711	-				-0.5
3,497,777	-				-0.5
3,497,784	-				+1.6
3,497,784	-				-1.0
3,497,788	+				+2.6
3,497,788	+				-0.9
3,497,801	-				-0.4
3,497,896	+				-0.6
3,497,904	-				-0.6
3,497,907	-				-0.9
3,497,937	-				+0.2
3,497,939	+				+1.3
3,497,939	+				-2.4
3,498,022	-				-1.6
3,498,025	+				+1.2
3,498,025	+				-0.7
3,498,034	-				-0.1
3,498,034	-				-1.9
3,498,048	+				-1.3
3,498,059	+				-1.8
3,498,059	+				-0.4
3,498,059	+				-0.1
3,498,061	-				-1.0
3,498,067	-	yhfM	b3370	0.10	+0.7
3,498,067	-	yhfM	b3370	0.10	-2.3
3,498,077	-	yhfM	b3370	0.11	+0.8
3,498,077	-	yhfM	b3370	0.11	-0.1
3,498,085	+	yhfM	b3370	0.11	+2.9
3,498,089	+	yhfM	b3370	0.12	-0.7
3,498,111	-	yhfM	b3370	0.13	-0.8
3,498,119	+	yhfM	b3370	0.14	+1.3
3,498,129	+	yhfM	b3370	0.15	-0.7
3,498,129	+	yhfM	b3370	0.15	-2.1
3,498,137	-	yhfM	b3370	0.15	+0.8
3,498,137	-	yhfM	b3370	0.15	+0.3
3,498,157	+	yhfM	b3370	0.17	+3.2
3,498,196	+	yhfM	b3370	0.20	-0.7
3,498,196	+	yhfM	b3370	0.20	+0.2
3,498,203	+	yhfM	b3370	0.20	+1.9
3,498,214	+	yhfM	b3370	0.21	-0.6
3,498,248	-	yhfM	b3370	0.24	+0.5
3,498,258	-	yhfM	b3370	0.24	-0.4
3,498,258	-	yhfM	b3370	0.24	-0.7
3,498,261	+	yhfM	b3370	0.25	-0.2
3,498,261	+	yhfM	b3370	0.25	-1.2
3,498,285	+	yhfM	b3370	0.26	-0.3
3,498,349	+	yhfM	b3370	0.31	+0.9
3,498,351	+	yhfM	b3370	0.31	-0.4
3,498,351	+	yhfM	b3370	0.31	+0.2
3,498,365	-	yhfM	b3370	0.32	+1.1
3,498,365	-	yhfM	b3370	0.32	+0.4
3,498,365	-	yhfM	b3370	0.32	+0.0
3,498,375	-	yhfM	b3370	0.33	+0.7
3,498,385	+	yhfM	b3370	0.34	+1.2
3,498,393	-	yhfM	b3370	0.34	-1.0
3,498,446	-	yhfM	b3370	0.38	-2.1
3,498,446	-	yhfM	b3370	0.38	-0.5
3,498,517	-	yhfM	b3370	0.44	+0.7
3,498,535	+	yhfM	b3370	0.45	-1.0
3,498,543	-	yhfM	b3370	0.46	-0.4
3,498,543	-	yhfM	b3370	0.46	-0.9
3,498,549	+	yhfM	b3370	0.46	+2.5
3,498,549	+	yhfM	b3370	0.46	+0.5
3,498,575	+	yhfM	b3370	0.48	+0.5
3,498,620	-	yhfM	b3370	0.51	-0.8
3,498,620	-	yhfM	b3370	0.51	-0.8
3,498,640	-	yhfM	b3370	0.53	-0.7
3,498,655	+	yhfM	b3370	0.54	+1.6
3,498,655	+	yhfM	b3370	0.54	-0.2
3,498,655	+	yhfM	b3370	0.54	+0.5
3,498,664	+	yhfM	b3370	0.55	+0.5
3,498,664	+	yhfM	b3370	0.55	-0.2
3,498,667	-	yhfM	b3370	0.55	+1.6
3,498,667	-	yhfM	b3370	0.55	-0.4
3,498,670	-	yhfM	b3370	0.55	-0.5
3,498,749	-	yhfM	b3370	0.61	+0.3
3,498,827	-	yhfM	b3370	0.67	+0.4
3,498,827	-	yhfM	b3370	0.67	-0.2
3,498,837	-	yhfM	b3370	0.68	-0.5
3,498,840	-	yhfM	b3370	0.68	+2.0
3,498,850	+	yhfM	b3370	0.69	-1.9
3,498,850	+	yhfM	b3370	0.69	-0.2
3,498,892	+	yhfM	b3370	0.72	-1.4
3,498,892	+	yhfM	b3370	0.72	+0.8
3,498,900	-	yhfM	b3370	0.72	-0.3
3,498,941	+	yhfM	b3370	0.75	-1.5
3,498,952	+	yhfM	b3370	0.76	-1.4
3,498,966	-	yhfM	b3370	0.77	-2.2
3,498,981	+	yhfM	b3370	0.78	+1.3
3,498,988	-	yhfM	b3370	0.79	-1.1
3,498,998	+	yhfM	b3370	0.80	-0.3
3,498,998	+	yhfM	b3370	0.80	-0.0
3,499,048	+	yhfM	b3370	0.83	+0.1
3,499,048	+	yhfM	b3370	0.83	+0.4
3,499,057	+	yhfM	b3370	0.84	+1.4
3,499,085	+	yhfM	b3370	0.86	-0.2
3,499,180	-				+1.3
3,499,213	-				+0.4
3,499,213	-				-1.2
3,499,213	-				-0.3
3,499,263	+				+0.2
3,499,263	+				-1.9
3,499,395	+	yhfN	b3371	0.10	-0.1
3,499,398	+	yhfN	b3371	0.11	+0.9
3,499,398	+	yhfN	b3371	0.11	+0.2
3,499,401	-	yhfN	b3371	0.11	+1.6
3,499,462	-	yhfN	b3371	0.17	-1.7
3,499,508	+	yhfN	b3371	0.21	-0.2
3,499,508	+	yhfN	b3371	0.21	-0.9
3,499,532	+	yhfN	b3371	0.24	-0.9
3,499,645	-	yhfN	b3371	0.35	+0.3
3,499,664	+	yhfN	b3371	0.37	-1.1
3,499,675	+	yhfN	b3371	0.38	-1.5
3,499,762	-	yhfN	b3371	0.46	-0.5
3,499,762	-	yhfN	b3371	0.46	-1.9
3,499,767	+	yhfN	b3371	0.47	-1.0
3,499,767	+	yhfN	b3371	0.47	-1.5
3,499,775	-	yhfN	b3371	0.47	+0.3
3,499,899	-	yhfN	b3371	0.60	-1.1
3,499,914	-	yhfN	b3371	0.61	+0.5
3,499,929	-	yhfN	b3371	0.62	-2.8
3,499,935	-	yhfN	b3371	0.63	-1.1
3,499,950	+	yhfN	b3371	0.65	-0.7
3,499,982	+	yhfN	b3371	0.68	-1.7
3,500,052	+	yhfN	b3371	0.74	-0.7
3,500,136	-	yhfN	b3371	0.83	-0.1
3,500,192	+	yhfN	b3371	0.88	+0.7
3,500,237	-				-2.5
3,500,237	-				-0.1
3,500,239	+				+0.2
3,500,245	-				+0.3