Strain Fitness in Escherichia coli BW25113 around b3130

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,274,468	-	garD	b3128	0.74	-2.1
3,274,508	-	garD	b3128	0.77	+2.6
3,274,541	-	garD	b3128	0.79	+2.1
3,274,571	+	garD	b3128	0.81	+0.3
3,274,619	+	garD	b3128	0.84	+1.2
3,274,623	+	garD	b3128	0.84	-1.0
3,274,709	+	garD	b3128	0.89	-1.8
3,274,836	-				+0.6
3,275,046	+				-1.6
3,275,046	+				-0.7
3,275,049	-				-1.1
3,275,049	-				-0.3
3,275,049	-				-1.6
3,275,051	+				-2.0
3,275,051	+				+2.1
3,275,057	-				+0.3
3,275,059	-	sohA	b3129	0.10	-0.7
3,275,063	+	sohA	b3129	0.12	-1.6
3,275,098	+	sohA	b3129	0.22	-0.3
3,275,108	+	sohA	b3129	0.25	-2.4
3,275,108	+	sohA	b3129	0.25	-0.9
3,275,118	+	sohA	b3129	0.28	-0.3
3,275,118	+	sohA	b3129	0.28	+1.4
3,275,318	-	sohA	b3129	0.88	-2.2
3,275,318	-	sohA	b3129	0.88	-1.0
3,275,392	+				-2.1
3,275,392	+				-0.2
3,275,392	+				+0.8
3,275,400	-				+1.1
3,275,400	-				-1.0
3,275,420	-	yhaV	b3130	0.13	-0.9
3,275,427	+	yhaV	b3130	0.15	-2.5
3,275,451	+	yhaV	b3130	0.20	-0.5
3,275,512	+	yhaV	b3130	0.33	-3.5
3,275,536	+	yhaV	b3130	0.38	+0.1
3,275,596	+	yhaV	b3130	0.51	-2.7
3,275,642	-	yhaV	b3130	0.61	-0.5
3,275,642	-	yhaV	b3130	0.61	-2.5
3,275,678	+	yhaV	b3130	0.69	-0.6
3,275,685	-	yhaV	b3130	0.70	+0.3
3,275,685	-	yhaV	b3130	0.70	-1.2
3,275,686	-	yhaV	b3130	0.70	-1.0
3,275,686	-	yhaV	b3130	0.70	+2.4
3,275,690	-	yhaV	b3130	0.71	+0.4
3,275,735	+	yhaV	b3130	0.81	-1.7
3,275,741	-	yhaV	b3130	0.82	-2.6
3,275,781	-				-0.1
3,275,781	-				-1.2
3,276,109	+	agaR	b3131	0.29	-1.3
3,276,131	-	agaR	b3131	0.31	+1.3
3,276,131	-	agaR	b3131	0.31	-1.5
3,276,131	-	agaR	b3131	0.31	-1.5
3,276,170	+	agaR	b3131	0.36	+0.8
3,276,242	-	agaR	b3131	0.45	-2.1
3,276,242	-				+0.3
3,276,270	+	agaR	b3131	0.48	+0.3
3,276,447	-	agaR	b3131	0.70	+0.8
3,276,447	-	agaR	b3131	0.70	+2.8
3,276,560	-	agaR	b3131	0.84	-2.1
3,276,602	-	agaR	b3131	0.89	-2.5
3,276,625	-				-0.1
3,276,635	-				+1.0
3,276,643	+				+0.6
3,276,762	-				-2.0
3,276,790	-				+0.5