Strain Fitness in Escherichia coli BW25113 around b3087

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,234,341	-	ygjP	b3085	0.71	+0.7
3,234,369	+	ygjP	b3085	0.77	-1.3
3,234,411	+	ygjP	b3085	0.85	-2.0
3,234,411	+	ygjP	b3085	0.85	+0.9
3,234,413	-	ygjP	b3085	0.86	+1.6
3,234,525	+				+0.1
3,234,544	-				-0.4
3,234,557	+				-1.3
3,234,708	+	ygjQ	b3086	0.21	-0.4
3,234,716	-	ygjQ	b3086	0.22	-0.0
3,234,793	-	ygjQ	b3086	0.33	+0.7
3,234,805	+	ygjQ	b3086	0.35	-0.9
3,234,805	+	ygjQ	b3086	0.35	-1.4
3,234,813	-	ygjQ	b3086	0.36	-0.5
3,234,876	+	ygjQ	b3086	0.45	+2.4
3,234,892	-	ygjQ	b3086	0.48	+2.1
3,234,892	-	ygjQ	b3086	0.48	+2.0
3,235,007	+	ygjQ	b3086	0.64	+0.0
3,235,015	-	ygjQ	b3086	0.65	+2.0
3,235,105	-	ygjQ	b3086	0.78	+0.3
3,235,105	-	ygjQ	b3086	0.78	+0.6
3,235,152	-	ygjQ	b3086	0.85	+1.2
3,235,229	-				-0.8
3,235,241	-				-0.6
3,235,267	-				+1.3
3,235,339	-				+1.0
3,235,398	-				+1.8
3,235,398	-				-1.2
3,235,444	-	ygjR	b3087	0.11	+0.3
3,235,649	+	ygjR	b3087	0.32	-1.0
3,235,746	-	ygjR	b3087	0.42	-0.7
3,235,746	-	ygjR	b3087	0.42	+2.1
3,235,848	+	ygjR	b3087	0.52	-2.1
3,235,910	-	ygjR	b3087	0.58	-0.9
3,235,910	-	ygjR	b3087	0.58	-0.7
3,235,958	+	ygjR	b3087	0.63	-0.7
3,235,983	+	ygjR	b3087	0.66	+0.3
3,236,005	+	ygjR	b3087	0.68	+0.5
3,236,005	+	ygjR	b3087	0.68	-1.6
3,236,035	+	ygjR	b3087	0.71	+0.3
3,236,066	+	ygjR	b3087	0.74	-0.6
3,236,068	-	ygjR	b3087	0.74	+0.8
3,236,185	-	ygjR	b3087	0.86	+0.5
3,236,222	+				+0.7
3,236,230	-				-0.2
3,236,230	-				+0.1
3,236,241	+				+1.2
3,236,241	+				-0.3
3,236,274	+				+0.3
3,236,429	+				-1.5
3,236,429	+				-0.8
3,236,508	+				-1.0
3,236,563	+				-1.1
3,236,563	+				+2.8
3,236,607	-				-0.1
3,236,620	+				-0.2
3,236,620	+				+0.8
3,236,672	-				+1.8
3,236,701	+	alx	b3088	0.10	-0.0
3,236,703	+	alx	b3088	0.10	-0.7
3,236,747	-	alx	b3088	0.15	-0.0
3,236,752	-	alx	b3088	0.16	+1.5
3,236,763	+	alx	b3088	0.17	-0.8
3,236,763	+	alx	b3088	0.17	+2.6
3,236,763	-	alx	b3088	0.17	-1.9
3,236,763	-	alx	b3088	0.17	-1.5
3,236,773	+	alx	b3088	0.18	-0.5
3,236,773	+	alx	b3088	0.18	+0.5
3,236,783	+	alx	b3088	0.19	-2.7
3,236,784	-	alx	b3088	0.19	+1.3
3,236,816	+	alx	b3088	0.22	+1.8
3,236,816	+	alx	b3088	0.22	-1.3
3,236,946	+	alx	b3088	0.36	-1.1
3,236,961	-	alx	b3088	0.37	-0.6
3,236,993	+	alx	b3088	0.40	+0.0
3,236,993	+	alx	b3088	0.40	-0.4
3,237,052	-	alx	b3088	0.47	+1.8
3,237,083	+	alx	b3088	0.50	+0.2
3,237,149	+	alx	b3088	0.57	-1.9
3,237,152	-	alx	b3088	0.57	+2.5
3,237,199	+	alx	b3088	0.62	+0.2
3,237,203	+	alx	b3088	0.62	+0.1
3,237,293	+	alx	b3088	0.72	-0.5
3,237,301	-	alx	b3088	0.72	-3.0
3,237,301	-	alx	b3088	0.72	-0.3
3,237,318	-	alx	b3088	0.74	-1.6
3,237,318	-	alx	b3088	0.74	-1.3