Strain Fitness in Escherichia coli BW25113 around b2989

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,135,848	+	gss	b2988	0.63	+0.1
3,135,848	+	gss	b2988	0.63	+1.0
3,135,902	-	gss	b2988	0.65	+1.1
3,135,959	-	gss	b2988	0.68	-0.5
3,136,065	+	gss	b2988	0.74	-0.2
3,136,072	+	gss	b2988	0.75	+0.2
3,136,073	-	gss	b2988	0.75	+0.9
3,136,245	+	gss	b2988	0.84	-0.0
3,136,254	-	gss	b2988	0.84	-0.2
3,136,321	-	gss	b2988	0.88	-1.1
3,136,325	-	gss	b2988	0.88	-0.2
3,136,325	-	gss	b2988	0.88	+1.8
3,136,472	-				-0.9
3,136,472	-				-1.5
3,136,502	-				+1.8
3,136,505	-				-1.0
3,136,505	-				-0.2
3,136,534	+				-1.1
3,136,629	+				-0.2
3,136,629	+				+0.3
3,136,637	-				-0.5
3,136,647	-				+0.2
3,136,648	-				+1.0
3,136,706	+				+0.4
3,136,706	+				+0.5
3,136,729	-				-1.9
3,137,122	-	b2989	b2989	0.43	-0.1
3,137,208	+	b2989	b2989	0.53	-1.0
3,137,208	+	b2989	b2989	0.53	-1.3
3,137,294	+	b2989	b2989	0.63	+2.0
3,137,339	-	b2989	b2989	0.68	+0.4
3,137,360	+				-0.5
3,137,372	+	b2989	b2989	0.72	-1.1
3,137,372	+	b2989	b2989	0.72	-0.9
3,137,406	+	b2989	b2989	0.76	-1.0
3,137,414	-	b2989	b2989	0.77	+0.2
3,137,463	+	b2989	b2989	0.82	-1.7
3,137,525	-	b2989	b2989	0.90	-2.7
3,137,528	+	b2989	b2989	0.90	+1.8
3,137,615	-				-0.0
3,137,615	-				-0.0
3,137,691	-				-1.2
3,137,700	+				+1.6
3,137,714	+				-2.2
3,137,717	-				-1.0
3,137,839	-	hybG	b2990	0.41	+0.0
3,137,839	-	hybG	b2990	0.41	-1.1
3,137,907	+	hybG	b2990	0.68	+1.9
3,137,986	+				-1.2
3,137,986	+				+0.3
3,138,086	+	hybF	b2991	0.25	-0.4
3,138,146	-	hybF	b2991	0.43	-0.7
3,138,152	+	hybF	b2991	0.45	-1.3
3,138,166	+	hybF	b2991	0.49	+1.7
3,138,233	-	hybF	b2991	0.68	+0.4
3,138,274	-	hybF	b2991	0.80	-1.3
3,138,274	-	hybF	b2991	0.80	+0.3
3,138,363	+				-1.2
3,138,474	+	hybE	b2992	0.29	-1.0
3,138,474	+	hybE	b2992	0.29	-1.3