Strain Fitness in Escherichia coli BW25113 around b2871

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
3,004,540	+	ygeW	b2870	0.21	-0.3
3,004,548	-	ygeW	b2870	0.22	+3.1
3,004,548	-	ygeW	b2870	0.22	-0.2
3,004,654	+	ygeW	b2870	0.31	-2.5
3,004,654	+	ygeW	b2870	0.31	-0.8
3,004,662	-	ygeW	b2870	0.32	+1.1
3,004,679	-	ygeW	b2870	0.33	+2.0
3,004,679	-	ygeW	b2870	0.33	+1.8
3,004,710	-	ygeW	b2870	0.36	-1.6
3,004,710	-	ygeW	b2870	0.36	-0.0
3,004,728	-	ygeW	b2870	0.37	+0.6
3,004,768	+	ygeW	b2870	0.41	-0.0
3,004,862	+	ygeW	b2870	0.49	+0.2
3,004,950	+	ygeW	b2870	0.56	-2.4
3,005,080	+	ygeW	b2870	0.67	-0.8
3,005,095	+	ygeW	b2870	0.68	-0.4
3,005,209	-	ygeW	b2870	0.78	+1.6
3,005,256	+	ygeW	b2870	0.82	+0.3
3,005,261	+	ygeW	b2870	0.82	+0.3
3,005,365	-				-0.5
3,005,420	+				-0.3
3,005,420	+				+2.5
3,005,430	-				-0.6
3,005,637	-				-0.2
3,005,637	-				+3.7
3,005,891	+	ygeX	b2871	0.30	-1.5
3,005,891	+	ygeX	b2871	0.30	-0.6
3,005,897	-	ygeX	b2871	0.30	-0.5
3,005,908	+	ygeX	b2871	0.31	-0.5
3,005,908	+	ygeX	b2871	0.31	-0.9
3,005,948	+	ygeX	b2871	0.35	-1.4
3,005,948	+	ygeX	b2871	0.35	-0.9
3,005,976	-	ygeX	b2871	0.37	-0.9
3,006,051	-	ygeX	b2871	0.43	+1.5
3,006,098	-	ygeX	b2871	0.47	-1.7
3,006,098	-	ygeX	b2871	0.47	+1.1
3,006,100	+	ygeX	b2871	0.47	+0.4
3,006,191	+	ygeX	b2871	0.55	+0.1
3,006,249	+	ygeX	b2871	0.60	-0.9
3,006,277	-	ygeX	b2871	0.62	+0.5
3,006,295	+	ygeX	b2871	0.64	-0.1
3,006,377	+	ygeX	b2871	0.71	+0.4
3,006,377	+	ygeX	b2871	0.71	-2.4
3,006,391	-	ygeX	b2871	0.72	-1.4
3,006,393	+	ygeX	b2871	0.72	-0.8
3,006,401	-	ygeX	b2871	0.73	-0.7
3,006,484	+	ygeX	b2871	0.80	+0.1
3,006,498	+	ygeX	b2871	0.81	-0.5
3,006,626	+				-0.9
3,006,642	+				-0.1
3,006,688	+				-0.4
3,006,730	-				+1.7
3,006,735	+				+0.6
3,006,735	+				-2.4
3,006,851	-				+0.7
3,006,851	-				+1.1
3,006,851	-				-0.3
3,006,912	-	ygeY	b2872	0.10	-0.4
3,006,916	+	ygeY	b2872	0.11	-1.5
3,006,976	+	ygeY	b2872	0.16	-1.6
3,007,018	-	ygeY	b2872	0.19	+0.9
3,007,028	+	ygeY	b2872	0.20	+0.3
3,007,137	+	ygeY	b2872	0.29	-0.4
3,007,211	+	ygeY	b2872	0.35	-1.5
3,007,211	+	ygeY	b2872	0.35	+1.3
3,007,316	+	ygeY	b2872	0.44	-0.4
3,007,693	-	ygeY	b2872	0.75	+1.9
3,007,693	-	ygeY	b2872	0.75	+0.7
3,007,695	+	ygeY	b2872	0.75	+0.6
3,007,703	-	ygeY	b2872	0.76	-0.6