Strain Fitness in Escherichia coli BW25113 around b2775

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
2,897,768	-	ygcW	b2774	0.33	-0.8
2,897,768	-	ygcW	b2774	0.33	-0.6
2,897,777	-	ygcW	b2774	0.34	+1.6
2,897,813	-	ygcW	b2774	0.39	-0.4
2,897,813	-	ygcW	b2774	0.39	+1.0
2,897,899	-	ygcW	b2774	0.49	+0.1
2,897,928	-	ygcW	b2774	0.53	-1.3
2,897,946	-	ygcW	b2774	0.55	+0.2
2,897,955	-	ygcW	b2774	0.57	+0.7
2,897,975	-	ygcW	b2774	0.59	+0.2
2,897,985	-	ygcW	b2774	0.60	+1.2
2,898,013	-	ygcW	b2774	0.64	-0.1
2,898,013	-	ygcW	b2774	0.64	+0.1
2,898,023	-	ygcW	b2774	0.65	+1.3
2,898,026	+	ygcW	b2774	0.66	-0.2
2,898,069	-	ygcW	b2774	0.71	-0.0
2,898,071	+	ygcW	b2774	0.71	+0.2
2,898,072	+	ygcW	b2774	0.72	-1.3
2,898,072	+	ygcW	b2774	0.72	-1.1
2,898,090	-	ygcW	b2774	0.74	+0.3
2,898,090	-	ygcW	b2774	0.74	-2.6
2,898,174	+	ygcW	b2774	0.84	-1.0
2,898,185	+	ygcW	b2774	0.86	-0.4
2,898,191	+	ygcW	b2774	0.87	-1.3
2,898,197	+	ygcW	b2774	0.87	+1.0
2,898,200	-	ygcW	b2774	0.88	-0.7
2,898,272	+				+1.3
2,898,291	+				+2.9
2,898,292	+				-2.3
2,898,292	+				-2.0
2,898,292	+				+0.8
2,898,292	+				-0.4
2,898,365	-				-1.4
2,898,384	-				-0.8
2,898,384	-				+2.6
2,898,402	-				-0.2
2,898,402	-				-0.7
2,898,413	+				-0.3
2,898,424	+				-0.5
2,898,430	+				+1.1
2,898,432	-				-0.2
2,898,434	+				+1.4
2,898,434	+				-0.8
2,898,468	+				+0.5
2,898,485	+				-0.9
2,898,485	+				+1.6
2,898,485	+				+0.1
2,898,485	+				-2.2
2,898,488	+				-2.1
2,898,495	-				+0.8
2,898,554	-				+0.6
2,898,612	-				+0.6
2,898,622	-				+0.4
2,898,627	-				+1.1
2,898,672	-				+0.4
2,898,672	-				+1.9
2,898,869	-	yqcE	b2775	0.20	+1.5
2,898,880	-	yqcE	b2775	0.21	-0.1
2,898,880	-	yqcE	b2775	0.21	+0.8
2,898,883	+	yqcE	b2775	0.21	-1.7
2,898,883	+	yqcE	b2775	0.21	+0.3
2,898,885	-	yqcE	b2775	0.21	+1.0
2,898,885	-	yqcE	b2775	0.21	-0.4
2,898,891	-	yqcE	b2775	0.22	-0.8
2,898,891	-	yqcE	b2775	0.22	+2.1
2,898,891	-	yqcE	b2775	0.22	+0.8
2,898,891	-	yqcE	b2775	0.22	-1.6
2,898,891	-	yqcE	b2775	0.22	-0.8
2,898,895	+	yqcE	b2775	0.22	+1.1
2,898,900	-	yqcE	b2775	0.22	-0.3
2,898,900	-	yqcE	b2775	0.22	+1.0
2,898,902	-	yqcE	b2775	0.23	+1.7
2,898,902	-	yqcE	b2775	0.23	+1.3
2,898,902	-	yqcE	b2775	0.23	+0.3
2,898,903	-	yqcE	b2775	0.23	-0.4
2,898,903	-	yqcE	b2775	0.23	-0.5
2,898,904	+	yqcE	b2775	0.23	+0.7
2,898,904	+	yqcE	b2775	0.23	+0.4
2,898,904	+	yqcE	b2775	0.23	+0.7
2,898,908	-	yqcE	b2775	0.23	+0.8
2,898,912	-	yqcE	b2775	0.23	-0.1
2,898,912	-	yqcE	b2775	0.23	-0.0
2,898,912	-	yqcE	b2775	0.23	+2.2
2,898,912	-	yqcE	b2775	0.23	+1.1
2,898,912	-	yqcE	b2775	0.23	+0.1
2,898,912	-	yqcE	b2775	0.23	+1.0
2,898,916	+	yqcE	b2775	0.24	+1.5
2,898,917	-	yqcE	b2775	0.24	-0.2
2,898,918	+	yqcE	b2775	0.24	+0.2
2,898,924	-	yqcE	b2775	0.24	-1.0
2,898,924	-	yqcE	b2775	0.24	+0.2
2,898,926	-	yqcE	b2775	0.24	+1.3
2,898,926	-	yqcE	b2775	0.24	+1.1
2,898,926	-	yqcE	b2775	0.24	+1.0
2,898,926	-	yqcE	b2775	0.24	+1.6
2,898,929	-	yqcE	b2775	0.25	+0.2
2,898,963	+	yqcE	b2775	0.27	-1.0
2,898,971	-	yqcE	b2775	0.28	-2.4
2,898,992	-	yqcE	b2775	0.30	-0.7
2,899,037	-	yqcE	b2775	0.33	-1.7
2,899,037	-	yqcE	b2775	0.33	+0.5
2,899,100	+	yqcE	b2775	0.38	+1.3
2,899,136	+	yqcE	b2775	0.41	+1.1
2,899,146	-	yqcE	b2775	0.42	-0.4
2,899,278	-	yqcE	b2775	0.52	-0.1
2,899,278	-	yqcE	b2775	0.52	+0.9
2,899,328	+	yqcE	b2775	0.56	+1.3
2,899,465	-	yqcE	b2775	0.67	-1.1
2,899,465	-	yqcE	b2775	0.67	-0.1
2,899,619	+	yqcE	b2775	0.79	-0.3
2,899,632	-	yqcE	b2775	0.80	+2.0
2,899,632	-	yqcE	b2775	0.80	-0.1
2,899,632	-	yqcE	b2775	0.80	+1.6
2,899,761	+	yqcE	b2775	0.90	-2.3
2,899,802	-				-0.4
2,899,856	+				+3.0
2,899,894	-				+0.1
2,900,144	-	ygcE	b2776	0.15	-0.2
2,900,169	+	ygcE	b2776	0.17	+0.6
2,900,187	-	ygcE	b2776	0.18	+0.3
2,900,273	-	ygcE	b2776	0.24	-2.2
2,900,376	+	ygcE	b2776	0.31	-0.4
2,900,376	+	ygcE	b2776	0.31	+1.1
2,900,376	+	ygcE	b2776	0.31	-0.9
2,900,429	+	ygcE	b2776	0.35	+0.4
2,900,429	+	ygcE	b2776	0.35	-0.6
2,900,473	-	ygcE	b2776	0.38	-0.2
2,900,508	-	ygcE	b2776	0.40	-0.3
2,900,700	+	ygcE	b2776	0.53	+1.7
2,900,700	+	ygcE	b2776	0.53	-2.7
2,900,764	-	ygcE	b2776	0.57	+0.4
2,900,764	-	ygcE	b2776	0.57	-1.7
2,900,857	-	ygcE	b2776	0.63	-0.9
2,900,866	+	ygcE	b2776	0.64	-0.3