Experiment: 3-methyl-1-butanol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiT and yeiA overlap by 7 nucleotides yeiA and mglC are separated by 242 nucleotides
b2146: yeiT - predicted oxidoreductase (NCBI), at 2,232,055 to 2,233,293
yeiT
b2147: yeiA - putative oxidoreductase (VIMSS), at 2,233,287 to 2,234,522
yeiA
b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775
mglC
Position (kb)
2233
2234
2235 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2232.311 kb on + strand, within yeiT at 2232.311 kb on + strand, within yeiT at 2232.326 kb on + strand, within yeiT at 2232.326 kb on + strand, within yeiT at 2232.326 kb on + strand, within yeiT at 2232.333 kb on - strand, within yeiT at 2232.333 kb on - strand, within yeiT at 2232.346 kb on + strand, within yeiT at 2232.473 kb on + strand, within yeiT at 2232.575 kb on + strand, within yeiT at 2232.643 kb on + strand, within yeiT at 2232.643 kb on + strand, within yeiT at 2232.699 kb on - strand, within yeiT at 2232.699 kb on - strand, within yeiT at 2232.719 kb on + strand, within yeiT at 2232.861 kb on - strand, within yeiT at 2232.995 kb on - strand, within yeiT at 2233.038 kb on + strand, within yeiT at 2233.102 kb on + strand, within yeiT at 2233.102 kb on + strand, within yeiT at 2233.125 kb on - strand, within yeiT at 2233.131 kb on + strand, within yeiT at 2233.283 kb on - strand at 2233.422 kb on - strand, within yeiA at 2233.584 kb on - strand, within yeiA at 2233.679 kb on - strand, within yeiA at 2233.690 kb on - strand, within yeiA at 2233.690 kb on - strand, within yeiA at 2233.711 kb on + strand at 2233.721 kb on + strand, within yeiA at 2233.721 kb on + strand, within yeiA at 2233.800 kb on - strand, within yeiA at 2233.904 kb on + strand, within yeiA at 2233.963 kb on + strand, within yeiA at 2234.029 kb on + strand, within yeiA at 2234.029 kb on + strand, within yeiA at 2234.029 kb on + strand, within yeiA at 2234.037 kb on - strand, within yeiA at 2234.078 kb on - strand, within yeiA at 2234.078 kb on - strand, within yeiA at 2234.127 kb on - strand, within yeiA at 2234.145 kb on + strand, within yeiA at 2234.145 kb on + strand, within yeiA at 2234.151 kb on + strand, within yeiA at 2234.151 kb on + strand, within yeiA at 2234.155 kb on - strand, within yeiA at 2234.155 kb on - strand, within yeiA at 2234.156 kb on - strand, within yeiA at 2234.156 kb on - strand, within yeiA at 2234.228 kb on - strand, within yeiA at 2234.235 kb on - strand, within yeiA at 2234.268 kb on + strand, within yeiA at 2234.289 kb on + strand, within yeiA at 2234.289 kb on - strand, within yeiA at 2234.335 kb on + strand, within yeiA at 2234.341 kb on - strand, within yeiA at 2234.356 kb on + strand, within yeiA at 2234.387 kb on + strand, within yeiA at 2234.402 kb on + strand at 2234.461 kb on + strand at 2234.561 kb on - strand at 2234.644 kb on + strand at 2234.789 kb on - strand at 2234.823 kb on + strand at 2234.843 kb on + strand at 2234.859 kb on + strand at 2234.923 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.944 kb on + strand, within mglC at 2234.956 kb on - strand, within mglC at 2234.963 kb on - strand, within mglC at 2234.963 kb on - strand, within mglC at 2234.988 kb on - strand, within mglC at 2235.007 kb on + strand, within mglC at 2235.021 kb on - strand, within mglC at 2235.075 kb on + strand, within mglC at 2235.103 kb on - strand, within mglC at 2235.103 kb on - strand, within mglC at 2235.107 kb on + strand, within mglC at 2235.107 kb on + strand, within mglC at 2235.113 kb on - strand, within mglC at 2235.113 kb on - strand, within mglC at 2235.209 kb on + strand, within mglC at 2235.259 kb on + strand, within mglC at 2235.366 kb on + strand, within mglC at 2235.366 kb on + strand, within mglC at 2235.473 kb on + strand, within mglC at 2235.473 kb on + strand, within mglC at 2235.522 kb on + strand, within mglC
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 1.25 vol% remove 2,232,311 + yeiT b2146 0.21 +0.6 2,232,311 + yeiT b2146 0.21 +0.1 2,232,326 + yeiT b2146 0.22 -0.1 2,232,326 + yeiT b2146 0.22 -0.4 2,232,326 + yeiT b2146 0.22 -0.0 2,232,333 - yeiT b2146 0.22 +1.9 2,232,333 - yeiT b2146 0.22 +1.1 2,232,346 + yeiT b2146 0.23 -0.3 2,232,473 + yeiT b2146 0.34 -1.2 2,232,575 + yeiT b2146 0.42 +1.6 2,232,643 + yeiT b2146 0.47 +0.9 2,232,643 + yeiT b2146 0.47 +0.5 2,232,699 - yeiT b2146 0.52 +1.0 2,232,699 - yeiT b2146 0.52 -0.1 2,232,719 + yeiT b2146 0.54 -0.3 2,232,861 - yeiT b2146 0.65 +1.0 2,232,995 - yeiT b2146 0.76 -0.0 2,233,038 + yeiT b2146 0.79 +0.5 2,233,102 + yeiT b2146 0.85 +0.3 2,233,102 + yeiT b2146 0.85 -1.2 2,233,125 - yeiT b2146 0.86 -0.8 2,233,131 + yeiT b2146 0.87 -1.7 2,233,283 - +1.5 2,233,422 - yeiA b2147 0.11 +0.4 2,233,584 - yeiA b2147 0.24 -0.6 2,233,679 - yeiA b2147 0.32 -0.9 2,233,690 - yeiA b2147 0.33 +2.6 2,233,690 - yeiA b2147 0.33 -0.6 2,233,711 + +0.3 2,233,721 + yeiA b2147 0.35 -1.8 2,233,721 + yeiA b2147 0.35 -1.6 2,233,800 - yeiA b2147 0.42 +0.8 2,233,904 + yeiA b2147 0.50 -0.4 2,233,963 + yeiA b2147 0.55 +1.7 2,234,029 + yeiA b2147 0.60 +0.8 2,234,029 + yeiA b2147 0.60 +1.8 2,234,029 + yeiA b2147 0.60 +0.9 2,234,037 - yeiA b2147 0.61 -0.2 2,234,078 - yeiA b2147 0.64 -0.4 2,234,078 - yeiA b2147 0.64 +3.0 2,234,127 - yeiA b2147 0.68 -1.0 2,234,145 + yeiA b2147 0.69 +2.3 2,234,145 + yeiA b2147 0.69 -0.3 2,234,151 + yeiA b2147 0.70 -0.4 2,234,151 + yeiA b2147 0.70 +0.5 2,234,155 - yeiA b2147 0.70 +1.0 2,234,155 - yeiA b2147 0.70 -0.0 2,234,156 - yeiA b2147 0.70 -0.2 2,234,156 - yeiA b2147 0.70 -0.9 2,234,228 - yeiA b2147 0.76 +2.0 2,234,235 - yeiA b2147 0.77 +2.1 2,234,268 + yeiA b2147 0.79 -0.1 2,234,289 + yeiA b2147 0.81 +2.0 2,234,289 - yeiA b2147 0.81 +0.8 2,234,335 + yeiA b2147 0.85 +0.3 2,234,341 - yeiA b2147 0.85 +1.5 2,234,356 + yeiA b2147 0.86 -0.6 2,234,387 + yeiA b2147 0.89 +0.8 2,234,402 + +1.1 2,234,461 + +0.6 2,234,561 - -0.9 2,234,644 + -0.2 2,234,789 - +1.8 2,234,823 + -2.0 2,234,843 + -0.5 2,234,859 + +0.6 2,234,923 + mglC b2148 0.16 -0.5 2,234,944 + mglC b2148 0.18 +0.3 2,234,944 + mglC b2148 0.18 +1.7 2,234,944 + mglC b2148 0.18 -0.0 2,234,944 + mglC b2148 0.18 +0.4 2,234,956 - mglC b2148 0.19 +0.0 2,234,963 - mglC b2148 0.20 -1.5 2,234,963 - mglC b2148 0.20 -2.4 2,234,988 - mglC b2148 0.22 +0.4 2,235,007 + mglC b2148 0.24 +1.9 2,235,021 - mglC b2148 0.25 -0.7 2,235,075 + mglC b2148 0.31 -0.3 2,235,103 - mglC b2148 0.33 -1.7 2,235,103 - mglC b2148 0.33 -2.4 2,235,107 + mglC b2148 0.34 -1.9 2,235,107 + mglC b2148 0.34 +0.3 2,235,113 - mglC b2148 0.34 +0.0 2,235,113 - mglC b2148 0.34 -1.0 2,235,209 + mglC b2148 0.44 +0.8 2,235,259 + mglC b2148 0.49 -1.2 2,235,366 + mglC b2148 0.59 -0.4 2,235,366 + mglC b2148 0.59 -1.7 2,235,473 + mglC b2148 0.70 -3.7 2,235,473 + mglC b2148 0.70 -0.2 2,235,522 + mglC b2148 0.75 -0.7
Or see this region's nucleotide sequence