Strain Fitness in Escherichia coli BW25113 around b1807
Experiment: 3-methyl-1-butanol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-1-butanol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,887,762 | - | +0.2 | |||
1,887,981 | + | -0.2 | |||
1,888,207 | + | yeaY | b1806 | 0.40 | +0.2 |
1,888,428 | - | yeaY | b1806 | 0.78 | -0.5 |
1,888,428 | - | yeaY | b1806 | 0.78 | -0.4 |
1,888,463 | + | yeaY | b1806 | 0.84 | -0.6 |
1,888,586 | + | -0.7 | |||
1,888,586 | + | -0.2 | |||
1,889,333 | - | +1.8 | |||
1,889,364 | - | -0.2 | |||
1,889,751 | + | yoaA | b1808 | 0.21 | -0.6 |
1,889,811 | - | yoaA | b1808 | 0.24 | +1.3 |
1,889,917 | + | yoaA | b1808 | 0.30 | +1.4 |
1,889,917 | + | yoaA | b1808 | 0.30 | -0.6 |
1,890,135 | - | yoaA | b1808 | 0.41 | -0.2 |
1,890,148 | - | yoaA | b1808 | 0.42 | -1.0 |
1,890,187 | + | yoaA | b1808 | 0.44 | +1.2 |
Or see this region's nucleotide sequence