Strain Fitness in Escherichia coli BW25113 around b0916
Experiment: 3-methyl-1-butanol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 3-methyl-1-butanol 1.25 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 968,649 | + | +1.3 | |||
| 968,674 | + | -1.5 | |||
| 968,737 | - | ycaQ | b0916 | 0.10 | +1.5 |
| 968,737 | - | ycaQ | b0916 | 0.10 | +1.1 |
| 968,775 | + | ycaQ | b0916 | 0.13 | +1.5 |
| 968,775 | + | ycaQ | b0916 | 0.13 | +1.2 |
| 968,811 | + | ycaQ | b0916 | 0.16 | +0.6 |
| 968,811 | + | +0.9 | |||
| 968,863 | - | ycaQ | b0916 | 0.20 | +0.7 |
| 968,865 | - | ycaQ | b0916 | 0.21 | -0.5 |
| 968,880 | + | ycaQ | b0916 | 0.22 | -0.1 |
| 968,880 | + | ycaQ | b0916 | 0.22 | +0.2 |
| 969,033 | - | ycaQ | b0916 | 0.34 | +0.7 |
| 969,050 | + | ycaQ | b0916 | 0.36 | -0.3 |
| 969,060 | - | ycaQ | b0916 | 0.36 | -0.1 |
| 969,275 | - | ycaQ | b0916 | 0.54 | +1.2 |
| 969,282 | + | ycaQ | b0916 | 0.54 | +0.5 |
| 969,300 | - | ycaQ | b0916 | 0.56 | +0.6 |
| 969,300 | - | ycaQ | b0916 | 0.56 | +2.0 |
| 969,547 | + | ycaQ | b0916 | 0.76 | +1.0 |
| 969,547 | + | ycaQ | b0916 | 0.76 | +1.2 |
| 969,550 | + | ycaQ | b0916 | 0.76 | +0.3 |
| 969,555 | - | ycaQ | b0916 | 0.76 | +1.2 |
| 969,690 | + | ycaQ | b0916 | 0.87 | +0.3 |
| 969,690 | + | ycaQ | b0916 | 0.87 | -0.8 |
| 969,774 | + | -0.8 | |||
| 969,830 | - | +0.3 |
Or see this region's nucleotide sequence