Experiment: 3-methyl-1-butanol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tauA and tauB are separated by 12 nucleotides tauB and tauC overlap by 4 nucleotides tauC and tauD overlap by 4 nucleotides
b0365: tauA - taurine transport system periplasmic protein (VIMSS), at 384,456 to 385,418
tauA
b0366: tauB - taurine transporter subunit (NCBI), at 385,431 to 386,198
tauB
b0367: tauC - taurine transporter subunit (NCBI), at 386,195 to 387,022
tauC
b0368: tauD - taurine dioxygenase (NCBI), at 387,019 to 387,870
tauD
Position (kb) 385
386
387 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 384.434 kb on - strand at 384.434 kb on - strand at 384.435 kb on - strand at 384.435 kb on - strand at 384.439 kb on - strand at 384.449 kb on + strand at 384.452 kb on - strand at 384.452 kb on - strand at 384.454 kb on - strand at 384.454 kb on - strand at 384.465 kb on - strand at 384.483 kb on - strand at 384.505 kb on + strand at 384.505 kb on + strand at 384.526 kb on - strand at 384.526 kb on - strand at 384.537 kb on - strand at 384.537 kb on - strand at 384.537 kb on - strand at 384.539 kb on - strand at 384.547 kb on - strand at 384.548 kb on - strand at 384.609 kb on + strand, within tauA at 384.738 kb on - strand, within tauA at 384.738 kb on - strand, within tauA at 384.860 kb on - strand, within tauA at 384.860 kb on - strand, within tauA at 384.860 kb on - strand, within tauA at 384.943 kb on - strand, within tauA at 384.943 kb on - strand, within tauA at 385.000 kb on + strand, within tauA at 385.040 kb on + strand, within tauA at 385.340 kb on + strand at 385.340 kb on + strand at 385.362 kb on + strand at 385.514 kb on + strand, within tauB at 385.514 kb on + strand, within tauB at 385.523 kb on - strand, within tauB at 385.523 kb on - strand, within tauB at 385.571 kb on + strand, within tauB at 385.571 kb on + strand, within tauB at 385.609 kb on - strand, within tauB at 385.687 kb on + strand, within tauB at 385.692 kb on + strand, within tauB at 385.817 kb on + strand, within tauB at 385.817 kb on + strand, within tauB at 385.868 kb on - strand, within tauB at 385.875 kb on - strand, within tauB at 385.875 kb on - strand, within tauB at 385.926 kb on - strand, within tauB at 385.974 kb on + strand, within tauB at 385.993 kb on + strand, within tauB at 385.999 kb on - strand, within tauB at 386.055 kb on + strand, within tauB at 386.094 kb on + strand, within tauB at 386.245 kb on - strand at 386.275 kb on + strand at 386.297 kb on - strand, within tauC at 386.297 kb on - strand, within tauC at 386.532 kb on + strand, within tauC at 386.532 kb on + strand, within tauC at 386.562 kb on + strand, within tauC at 386.586 kb on - strand, within tauC at 386.729 kb on + strand, within tauC at 386.829 kb on - strand, within tauC at 386.958 kb on + strand at 387.043 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-1-butanol 1.25 vol% remove 384,434 - +3.5 384,434 - -0.9 384,435 - -0.4 384,435 - +0.3 384,439 - +0.1 384,449 + -0.7 384,452 - +2.4 384,452 - -0.7 384,454 - -0.5 384,454 - -2.9 384,465 - -0.5 384,483 - +2.1 384,505 + -0.7 384,505 + -0.4 384,526 - -1.2 384,526 - -1.2 384,537 - +0.0 384,537 - +1.4 384,537 - +1.3 384,539 - -0.8 384,547 - +0.7 384,548 - +0.6 384,609 + tauA b0365 0.16 +0.1 384,738 - tauA b0365 0.29 -0.1 384,738 - tauA b0365 0.29 -1.6 384,860 - tauA b0365 0.42 -0.8 384,860 - tauA b0365 0.42 +0.3 384,860 - tauA b0365 0.42 +1.1 384,943 - tauA b0365 0.51 +0.7 384,943 - tauA b0365 0.51 -0.1 385,000 + tauA b0365 0.56 -0.1 385,040 + tauA b0365 0.61 +1.0 385,340 + +1.5 385,340 + +0.5 385,362 + -1.6 385,514 + tauB b0366 0.11 -1.7 385,514 + tauB b0366 0.11 +2.9 385,523 - tauB b0366 0.12 -0.1 385,523 - tauB b0366 0.12 -1.1 385,571 + tauB b0366 0.18 -0.8 385,571 + tauB b0366 0.18 -0.8 385,609 - tauB b0366 0.23 +0.1 385,687 + tauB b0366 0.33 +0.4 385,692 + tauB b0366 0.34 -0.7 385,817 + tauB b0366 0.50 +0.9 385,817 + tauB b0366 0.50 -0.1 385,868 - tauB b0366 0.57 -0.1 385,875 - tauB b0366 0.58 -0.1 385,875 - tauB b0366 0.58 -0.6 385,926 - tauB b0366 0.64 -0.1 385,974 + tauB b0366 0.71 -0.0 385,993 + tauB b0366 0.73 +0.3 385,999 - tauB b0366 0.74 -1.2 386,055 + tauB b0366 0.81 -0.1 386,094 + tauB b0366 0.86 -0.4 386,245 - -1.6 386,275 + +0.1 386,297 - tauC b0367 0.12 -0.7 386,297 - tauC b0367 0.12 -2.3 386,532 + tauC b0367 0.41 +0.1 386,532 + tauC b0367 0.41 +0.7 386,562 + tauC b0367 0.44 +0.8 386,586 - tauC b0367 0.47 -1.9 386,729 + tauC b0367 0.64 +2.3 386,829 - tauC b0367 0.77 -1.6 386,958 + +0.2 387,043 - +0.3
Or see this region's nucleotide sequence