Strain Fitness in Escherichia coli BW25113 around b0253

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
266,353	-				+0.3
266,433	+				-2.5
266,436	-				-3.0
266,449	+				+0.7
266,464	-				+1.9
266,569	-	yafZ	b0252	0.20	+1.6
266,668	-	yafZ	b0252	0.32	-0.2
266,773	-	yafZ	b0252	0.44	+0.3
266,810	-	yafZ	b0252	0.49	+0.1
266,946	-	yafZ	b0252	0.65	+1.4
267,028	-	yafZ	b0252	0.75	+0.4
267,028	-	yafZ	b0252	0.75	-3.0
267,062	-	yafZ	b0252	0.80	-1.6
267,062	-	yafZ	b0252	0.80	-0.1
267,093	+	yafZ	b0252	0.83	+0.1
267,122	+	yafZ	b0252	0.87	+1.1
267,137	+	yafZ	b0252	0.89	+1.4
267,137	+	yafZ	b0252	0.89	+2.7
267,168	-				-0.8
267,229	+				-1.1
267,229	+				-3.0
267,289	+				+2.7
267,289	+				-0.5
267,317	+				-2.5
267,320	-				+1.6
267,351	-				+0.5
267,351	-				-1.4
267,437	-	ykfA	b0253	0.13	-1.2
267,580	-	ykfA	b0253	0.30	-1.0
267,604	+	ykfA	b0253	0.33	+0.3
267,607	-	ykfA	b0253	0.33	+0.9
267,607	-	ykfA	b0253	0.33	+0.6
267,617	-	ykfA	b0253	0.34	+2.4
267,622	+	ykfA	b0253	0.35	-0.5
267,622	+	ykfA	b0253	0.35	-0.1
267,622	+	ykfA	b0253	0.35	+1.4
267,687	-	ykfA	b0253	0.42	-0.6
267,715	-	ykfA	b0253	0.46	-2.8
267,716	+	ykfA	b0253	0.46	+0.7
267,720	-	ykfA	b0253	0.46	-0.3
267,726	+	ykfA	b0253	0.47	-1.3
267,734	-	ykfA	b0253	0.48	+2.0
267,758	-	ykfA	b0253	0.51	-1.7
267,771	-	ykfA	b0253	0.52	-0.0
267,828	+	ykfA	b0253	0.59	+3.9
267,838	-	ykfA	b0253	0.60	+1.6
267,838	-	ykfA	b0253	0.60	+0.4
267,864	-	ykfA	b0253	0.63	-0.4
267,869	-	ykfA	b0253	0.63	+1.1
267,879	-	ykfA	b0253	0.65	-0.6
267,879	-	ykfA	b0253	0.65	+1.0
267,879	-	ykfA	b0253	0.65	+2.2
267,879	-	ykfA	b0253	0.65	-0.8
267,909	+	ykfA	b0253	0.68	+0.3
267,933	-	ykfA	b0253	0.71	+1.2
267,978	-	ykfA	b0253	0.76	-1.5
267,978	-	ykfA	b0253	0.76	-2.1
268,000	+	ykfA	b0253	0.79	+1.1
268,120	+				-0.7
268,302	-				-1.5
268,305	+				+0.9
268,310	-				+0.9
268,310	-				-1.0
268,316	-				+1.2
268,326	-				-0.7
268,373	+				+0.2
268,384	+				+2.7
268,384	+				-1.9
268,385	+				+0.1
268,393	-				-0.6
268,494	-				+0.6
268,494	-				-0.8
268,538	-				+0.5
268,584	-				-0.1
268,591	-				-1.0
268,591	-				-0.1
268,623	-	perR	b0254	0.12	-2.1
268,645	-	perR	b0254	0.15	-1.7
268,657	-	perR	b0254	0.16	+1.5
268,809	-	perR	b0254	0.33	-0.3
268,853	+	perR	b0254	0.38	+1.0
268,873	+	perR	b0254	0.40	+0.8
268,873	+	perR	b0254	0.40	+0.9
268,928	+	perR	b0254	0.46	+0.0
268,967	-	perR	b0254	0.51	+0.6
268,967	-	perR	b0254	0.51	+0.4
268,971	-	perR	b0254	0.51	+2.1
268,971	-	perR	b0254	0.51	-0.1
268,993	-	perR	b0254	0.54	-3.7
269,108	+	perR	b0254	0.67	+0.9
269,108	+	perR	b0254	0.67	-0.5
269,116	-	perR	b0254	0.67	+0.1
269,116	-	perR	b0254	0.67	-0.1
269,116	-	perR	b0254	0.67	-1.5
269,131	+	perR	b0254	0.69	+1.3
269,157	-	perR	b0254	0.72	-2.1