Strain Fitness in Escherichia coli BW25113 around b0046

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
46,284	-	yaaU	b0045	0.36	-0.9
46,329	+	yaaU	b0045	0.39	+0.4
46,329	+	yaaU	b0045	0.39	-1.1
46,463	+	yaaU	b0045	0.49	+1.6
46,463	+	yaaU	b0045	0.49	+0.0
46,564	+	yaaU	b0045	0.57	+0.9
46,564	+	yaaU	b0045	0.57	+2.0
46,575	+	yaaU	b0045	0.58	+0.7
46,707	-	yaaU	b0045	0.68	-0.1
46,707	-	yaaU	b0045	0.68	-1.5
46,800	+	yaaU	b0045	0.75	-1.5
46,920	-	yaaU	b0045	0.84	+0.8
47,003	+	yaaU	b0045	0.90	-0.0
47,067	+				+0.9
47,097	-				+0.5
47,097	-				+0.4
47,113	-				-0.4
47,113	-				-1.2
47,202	-				+1.3
47,225	+				+0.5
47,225	+				+1.6
47,247	-				+0.7
47,269	+				-0.2
47,359	-	kefF	b0046	0.21	+0.3
47,364	-	kefF	b0046	0.22	+0.8
47,364	-	kefF	b0046	0.22	-0.0
47,364	-	kefF	b0046	0.22	-0.3
47,364	-	kefF	b0046	0.22	-1.4
47,402	-	kefF	b0046	0.29	-0.5
47,412	-	kefF	b0046	0.31	+1.0
47,446	+	kefF	b0046	0.38	-0.2
47,454	+	kefF	b0046	0.39	+2.4
47,503	+	kefF	b0046	0.48	+1.6
47,504	+	kefF	b0046	0.49	+1.4
47,504	+	kefF	b0046	0.49	+1.5
47,639	+	kefF	b0046	0.74	+0.7
47,651	+	kefF	b0046	0.76	+1.3
47,675	+	kefF	b0046	0.81	-0.1
47,681	+	kefF	b0046	0.82	-1.5
47,681	+	kefF	b0046	0.82	+2.4
47,730	+				-0.2
47,762	+				-1.4
47,774	-				+0.9
47,784	-				-1.5
47,823	+				-0.1
47,823	+				-0.5
47,832	+				-0.0
47,832	+				-0.5
47,836	+				+0.6
47,848	+				-0.1
47,859	+				-0.9
47,921	+				+0.3
47,948	+				+1.1
47,948	+				-1.0
47,958	+	kefC	b0047	0.10	-1.0
47,958	+	kefC	b0047	0.10	-1.9
47,977	-	kefC	b0047	0.11	+0.6
48,009	-	kefC	b0047	0.13	-0.2
48,009	-	kefC	b0047	0.13	-0.3
48,009	-	kefC	b0047	0.13	+0.6
48,031	+	kefC	b0047	0.14	+0.0
48,227	+	kefC	b0047	0.25	+0.1
48,227	-	kefC	b0047	0.25	+1.5
48,228	+	kefC	b0047	0.25	+0.7
48,235	-	kefC	b0047	0.25	-0.3
48,253	-	kefC	b0047	0.26	+1.1
48,348	+	kefC	b0047	0.31	-3.4
48,394	+	kefC	b0047	0.34	-1.5
48,408	+	kefC	b0047	0.34	+2.2
48,408	+	kefC	b0047	0.34	-0.2
48,569	+	kefC	b0047	0.43	+0.1
48,569	+	kefC	b0047	0.43	-0.2
48,614	+	kefC	b0047	0.45	-1.7
48,760	+	kefC	b0047	0.53	+2.7
48,760	+	kefC	b0047	0.53	-1.0