Strain Fitness in Pseudomonas putida KT2440 around PP_4321

Experiment: 3-methyl-3-butenol (commercial) 0.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol (commercial) 0.25 vol%
4,911,198	+		PP_4320	0.57	-0.5
4,911,233	+		PP_4320	0.60	-1.7
4,911,234	-		PP_4320	0.60	-0.8
4,911,251	+		PP_4320	0.61	-1.1
4,911,251	+		PP_4320	0.61	+0.1
4,911,252	-		PP_4320	0.62	-2.0
4,911,252	-		PP_4320	0.62	-0.9
4,911,303	+		PP_4320	0.66	-0.4
4,911,384	-				+0.6
4,912,108	-		PP_5748	0.85	-0.0
4,912,108	-		PP_5748	0.85	-0.0
4,912,314	-				+1.0
4,912,854	-				-0.7
4,912,858	-				+1.6