Strain Fitness in Pseudomonas putida KT2440 around PP_4237

Experiment: 3-methyl-3-butenol (commercial) 0.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol (commercial) 0.25 vol%
4,810,347	+		PP_4236	0.22	-1.6
4,810,359	+		PP_4236	0.24	-1.3
4,810,359	+		PP_4236	0.24	-1.6
4,810,360	-		PP_4236	0.24	-1.0
4,810,360	-		PP_4236	0.24	-1.5
4,810,548	+		PP_4236	0.46	-1.1
4,810,548	+		PP_4236	0.46	-1.1
4,810,620	+		PP_4236	0.55	-2.1
4,810,621	-		PP_4236	0.55	-0.7
4,810,875	+		PP_4236	0.85	-1.1
4,810,875	+		PP_4236	0.85	-1.8
4,811,149	+		PP_4237	0.20	-0.0
4,811,185	+		PP_4237	0.25	-0.4
4,811,185	+		PP_4237	0.25	+1.0
4,811,186	-		PP_4237	0.25	-0.2
4,811,276	+		PP_4237	0.36	+0.5
4,811,277	-		PP_4237	0.37	+0.6
4,811,277	-		PP_4237	0.37	+0.1
4,811,277	-		PP_4237	0.37	-0.3
4,811,278	+		PP_4237	0.37	+0.4
4,811,278	+		PP_4237	0.37	-1.8
4,811,279	-		PP_4237	0.37	+0.6
4,811,457	+		PP_4237	0.60	-0.8
4,811,457	+		PP_4237	0.60	+0.2
4,811,458	-		PP_4237	0.60	+0.5
4,811,756	-				-1.4
4,811,995	+		PP_4238	0.73	+0.4
4,812,017	+		PP_4238	0.80	-0.4
4,812,017	+		PP_4238	0.80	-0.3
4,812,078	+				+0.1
4,812,131	+				-0.0
4,812,150	-				+0.6
4,812,230	+				-0.3
4,812,452	+				-0.9
4,812,453	-				-0.2
4,812,523	+		PP_5665	0.21	-0.3
4,812,692	-				-0.5