Strain Fitness in Pseudomonas putida KT2440 around PP_3191

Experiment: 3-methyl-3-butenol (commercial) 0.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-3-butenol (commercial) 0.25 vol%
3,619,482	+				+0.7
3,619,482	+				-0.1
3,619,702	-		PP_3190	0.31	-1.1
3,619,847	+		PP_3190	0.47	-0.1
3,620,135	+		PP_3190	0.77	+0.4
3,620,549	+		PP_3191	0.19	+0.5
3,620,829	+		PP_3191	0.46	-0.1
3,620,866	+		PP_3191	0.49	+0.2
3,620,866	+		PP_3191	0.49	+1.6
3,620,866	+		PP_3191	0.49	+0.4
3,620,883	+		PP_3191	0.51	+1.0
3,621,013	+		PP_3191	0.63	+2.0
3,621,014	-		PP_3191	0.63	-0.1
3,621,014	-		PP_3191	0.63	+0.2
3,621,299	+				+0.6
3,621,300	-				+0.9
3,621,300	-				+0.4
3,621,300	-				-0.8
3,621,454	+				-0.8
3,621,455	-				+0.2
3,621,460	+				-0.2
3,621,500	-		PP_3192	0.11	-1.0
3,621,596	+		PP_3192	0.27	-0.5
3,621,760	+		PP_3192	0.54	+0.2
3,621,855	-		PP_3192	0.70	-0.0
3,621,923	+		PP_3192	0.81	+0.2
3,621,933	-		PP_3192	0.83	-0.2
3,621,955	-		PP_3192	0.86	-0.4
3,621,985	+				-0.4
3,622,043	-				+0.3
3,622,069	-				-0.5
3,622,069	-				+0.4
3,622,087	-				+0.3
3,622,157	-				+0.6