Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1565

Experiment: Lactulose 20mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Lactulose 20mM (C)
1,797,557	-				+1.2
1,797,557	-				-0.1
1,797,557	-				+2.0
1,797,561	-				-0.5
1,797,640	+				+1.1
1,797,661	+				+0.2
1,797,663	+				+3.0
1,797,664	-				+1.3
1,797,664	-				-0.1
1,797,685	-		Echvi_1564	0.12	+0.3
1,797,699	+		Echvi_1564	0.14	+2.9
1,797,726	+		Echvi_1564	0.17	+1.5
1,797,726	+		Echvi_1564	0.17	-0.9
1,797,726	+		Echvi_1564	0.17	-0.1
1,797,726	+		Echvi_1564	0.17	-2.5
1,797,726	+		Echvi_1564	0.17	+1.5
1,797,726	+		Echvi_1564	0.17	-0.2
1,797,726	+		Echvi_1564	0.17	-1.6
1,797,726	+		Echvi_1564	0.17	+0.7
1,797,727	-		Echvi_1564	0.17	-0.3
1,797,727	-		Echvi_1564	0.17	-1.2
1,797,730	+		Echvi_1564	0.17	+1.0
1,797,731	-		Echvi_1564	0.18	+0.5
1,797,731	-		Echvi_1564	0.18	-0.1
1,797,738	-		Echvi_1564	0.18	+0.2
1,797,738	-		Echvi_1564	0.18	-0.0
1,797,773	-		Echvi_1564	0.23	+1.7
1,797,773	-		Echvi_1564	0.23	+0.1
1,797,780	+		Echvi_1564	0.24	+1.3
1,797,780	+		Echvi_1564	0.24	+0.6
1,797,781	-		Echvi_1564	0.24	-0.4
1,797,781	-		Echvi_1564	0.24	-0.6
1,797,781	-		Echvi_1564	0.24	+0.6
1,797,781	-		Echvi_1564	0.24	+0.7
1,797,781	-		Echvi_1564	0.24	+0.7
1,797,785	-		Echvi_1564	0.24	-0.9
1,797,849	-		Echvi_1564	0.32	+0.7
1,797,855	+		Echvi_1564	0.33	+0.4
1,797,855	+		Echvi_1564	0.33	-1.6
1,797,855	+		Echvi_1564	0.33	-1.5
1,797,859	-		Echvi_1564	0.33	+0.6
1,797,884	+		Echvi_1564	0.37	+2.6
1,797,884	+		Echvi_1564	0.37	+0.3
1,797,884	+		Echvi_1564	0.37	-1.7
1,797,884	+		Echvi_1564	0.37	-0.1
1,797,885	-		Echvi_1564	0.37	-0.1
1,797,885	-		Echvi_1564	0.37	-0.9
1,797,885	-		Echvi_1564	0.37	-0.3
1,797,885	-		Echvi_1564	0.37	-0.2
1,797,889	+		Echvi_1564	0.37	+0.6
1,797,889	+		Echvi_1564	0.37	-0.3
1,797,890	-		Echvi_1564	0.37	-2.6
1,798,014	-		Echvi_1564	0.53	+0.3
1,798,118	-		Echvi_1564	0.66	+0.2
1,798,135	+		Echvi_1564	0.68	-0.4
1,798,136	-		Echvi_1564	0.68	-0.6
1,798,140	-		Echvi_1564	0.68	+0.8
1,798,140	-		Echvi_1564	0.68	-1.7
1,798,140	-		Echvi_1564	0.68	+0.7
1,798,211	-		Echvi_1564	0.77	-0.1
1,798,211	-		Echvi_1564	0.77	+0.8
1,798,211	-		Echvi_1564	0.77	+1.1
1,798,211	-		Echvi_1564	0.77	-0.5
1,798,320	+				+1.4
1,798,327	+				+0.1
1,798,327	+				-0.9
1,798,328	-				-0.7
1,798,361	+				+1.8
1,798,361	+				+0.2
1,798,362	-				-0.9
1,798,369	+				+1.0
1,798,369	+				-1.1
1,798,369	+				+0.4
1,798,370	-				-0.1
1,798,370	-				+3.8
1,798,373	+				+1.4
1,798,374	-				+1.2
1,798,391	+				-0.4
1,798,392	-				+3.8
1,798,394	+				+0.2
1,798,395	-				-1.6
1,798,395	-				-1.3
1,798,462	+				+0.8
1,798,462	+				-1.1
1,798,463	-				-1.5
1,798,470	-				-0.7
1,798,514	-				-1.9
1,798,738	+		Echvi_1565	0.15	-0.6
1,798,742	-		Echvi_1565	0.15	-2.6
1,798,781	-		Echvi_1565	0.17	-2.3
1,798,784	+		Echvi_1565	0.18	-0.6
1,798,849	+		Echvi_1565	0.21	-1.0
1,798,850	-		Echvi_1565	0.21	-1.3
1,798,858	+		Echvi_1565	0.22	-1.3
1,798,859	-		Echvi_1565	0.22	+0.4
1,798,859	-		Echvi_1565	0.22	+0.4
1,798,904	+		Echvi_1565	0.24	-0.6
1,798,904	+		Echvi_1565	0.24	+0.7
1,798,996	+		Echvi_1565	0.30	-2.8
1,798,997	-		Echvi_1565	0.30	-0.4
1,799,001	-		Echvi_1565	0.30	-1.1
1,799,033	+		Echvi_1565	0.32	-1.3
1,799,033	+		Echvi_1565	0.32	-0.3
1,799,034	-		Echvi_1565	0.32	-2.3
1,799,034	-		Echvi_1565	0.32	-3.1
1,799,034	-		Echvi_1565	0.32	-2.4
1,799,039	-		Echvi_1565	0.32	+0.4
1,799,039	-		Echvi_1565	0.32	-1.9
1,799,195	+		Echvi_1565	0.41	-0.6
1,799,252	+		Echvi_1565	0.44	-2.3
1,799,336	-		Echvi_1565	0.49	-1.2
1,799,372	+		Echvi_1565	0.51	-1.2
1,799,372	+		Echvi_1565	0.51	+0.2
1,799,372	+		Echvi_1565	0.51	-2.3
1,799,406	+		Echvi_1565	0.53	-0.5
1,799,430	+		Echvi_1565	0.54	-0.8
1,799,449	+		Echvi_1565	0.55	+0.4
1,799,476	+		Echvi_1565	0.56	-1.4
1,799,477	-		Echvi_1565	0.57	-1.3
1,799,477	-		Echvi_1565	0.57	-2.0
1,799,495	-		Echvi_1565	0.58	-0.0
1,799,500	-		Echvi_1565	0.58	-2.9
1,799,500	-		Echvi_1565	0.58	-2.9
1,799,500	-		Echvi_1565	0.58	-3.2
1,799,500	-		Echvi_1565	0.58	-0.8
1,799,509	-		Echvi_1565	0.58	-0.1
1,799,509	-		Echvi_1565	0.58	-1.4
1,799,545	+		Echvi_1565	0.60	-0.6
1,799,545	+		Echvi_1565	0.60	-1.1
1,799,545	+		Echvi_1565	0.60	-0.2
1,799,551	-		Echvi_1565	0.61	-1.2
1,799,551	-		Echvi_1565	0.61	-1.3
1,799,551	-		Echvi_1565	0.61	-1.1
1,799,609	-		Echvi_1565	0.64	-3.5
1,799,629	+		Echvi_1565	0.65	-0.9
1,799,664	+		Echvi_1565	0.67	+0.6
1,799,664	+		Echvi_1565	0.67	-0.2
1,799,664	+		Echvi_1565	0.67	-0.1
1,799,665	-		Echvi_1565	0.67	-1.4
1,799,665	-		Echvi_1565	0.67	-0.7
1,799,672	+		Echvi_1565	0.67	-1.4
1,799,672	+		Echvi_1565	0.67	-3.2
1,799,673	-		Echvi_1565	0.68	-1.1
1,799,695	-		Echvi_1565	0.69	-4.1
1,799,695	-		Echvi_1565	0.69	+0.4
1,799,753	+		Echvi_1565	0.72	-2.3
1,799,800	+		Echvi_1565	0.75	-1.7
1,799,801	-		Echvi_1565	0.75	-2.1
1,799,834	+		Echvi_1565	0.77	-1.4
1,799,835	-		Echvi_1565	0.77	-2.0
1,799,878	+		Echvi_1565	0.79	-2.8
1,799,894	-		Echvi_1565	0.80	+1.2
1,799,945	+		Echvi_1565	0.83	+1.2
1,799,963	+		Echvi_1565	0.84	-3.1
1,799,984	+		Echvi_1565	0.85	-0.9
1,799,984	+		Echvi_1565	0.85	-1.6
1,799,984	+		Echvi_1565	0.85	-1.6
1,799,992	+		Echvi_1565	0.85	-2.7
1,799,992	+		Echvi_1565	0.85	-0.6
1,800,019	+		Echvi_1565	0.87	-2.0
1,800,020	-		Echvi_1565	0.87	-1.6
1,800,242	+				-2.0
1,800,269	+				+0.4
1,800,269	+				-0.5
1,800,285	-				-0.1
1,800,295	+				+1.0
1,800,308	+				+0.4
1,800,317	+				-1.4
1,800,318	-				-2.6
1,800,318	-				-0.9
1,800,348	+				-0.3
1,800,348	+				-2.2
1,800,348	+				+0.7
1,800,349	-				-0.2
1,800,349	-				-3.4
1,800,411	-		Echvi_1566	0.15	-0.3
1,800,453	-		Echvi_1566	0.21	-2.1
1,800,511	+		Echvi_1566	0.29	-1.7
1,800,512	-		Echvi_1566	0.29	-2.1
1,800,545	+		Echvi_1566	0.34	-2.9
1,800,545	+		Echvi_1566	0.34	-1.7
1,800,545	+		Echvi_1566	0.34	-1.1
1,800,546	-		Echvi_1566	0.34	-0.6
1,800,546	-		Echvi_1566	0.34	-0.1
1,800,546	-		Echvi_1566	0.34	-0.8
1,800,612	-		Echvi_1566	0.44	-2.0
1,800,629	+		Echvi_1566	0.46	-1.4
1,800,741	+		Echvi_1566	0.62	-0.9
1,800,742	-		Echvi_1566	0.62	-1.6
1,800,746	+		Echvi_1566	0.63	-1.7
1,800,747	-		Echvi_1566	0.63	-1.8
1,800,747	-		Echvi_1566	0.63	-0.8
1,800,747	-		Echvi_1566	0.63	-2.4
1,800,747	-		Echvi_1566	0.63	-1.9
1,800,909	-		Echvi_1566	0.87	-2.7
1,800,917	+		Echvi_1566	0.88	-1.1
1,800,917	+		Echvi_1566	0.88	-1.0
1,801,147	-		Echvi_1567	0.18	+0.6
1,801,147	-		Echvi_1567	0.18	-0.8