Strain Fitness in Escherichia coli BW25113 around b4188

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
4,413,088	+	aidB	b4187	0.49	+0.1
4,413,088	-	aidB	b4187	0.49	+1.6
4,413,123	+	aidB	b4187	0.51	-0.3
4,413,240	-	aidB	b4187	0.58	+0.6
4,413,240	-	aidB	b4187	0.58	-0.2
4,413,318	-	aidB	b4187	0.63	+0.4
4,413,489	+	aidB	b4187	0.73	-1.5
4,413,521	+	aidB	b4187	0.75	+0.8
4,413,586	+	aidB	b4187	0.79	+1.9
4,413,690	-	aidB	b4187	0.86	-0.8
4,413,735	+	aidB	b4187	0.88	+2.3
4,413,735	+	aidB	b4187	0.88	-1.0
4,413,865	+				-0.7
4,413,918	+				-0.0
4,413,918	-				-0.3
4,414,039	+				-0.4
4,414,039	+				-3.0
4,414,049	-				-1.0
4,414,049	-				+1.9
4,414,051	+				+1.9
4,414,136	+	yjfN	b4188	0.35	-1.4
4,414,136	+	yjfN	b4188	0.35	-1.1
4,414,142	-	yjfN	b4188	0.37	+0.4
4,414,142	-	yjfN	b4188	0.37	-0.8
4,414,160	+	yjfN	b4188	0.43	-0.8
4,414,181	-	yjfN	b4188	0.51	-0.1
4,414,206	-	yjfN	b4188	0.60	+0.6
4,414,226	-	yjfN	b4188	0.67	-1.8
4,414,226	-	yjfN	b4188	0.67	-1.7
4,414,230	+	yjfN	b4188	0.69	+2.7
4,414,252	+	yjfN	b4188	0.77	-0.7
4,414,254	+	yjfN	b4188	0.78	-1.5
4,414,257	-	yjfN	b4188	0.79	-2.3
4,414,257	-	yjfN	b4188	0.79	-0.9
4,414,345	+				+0.1
4,414,355	+				+0.9
4,414,356	+				-0.7
4,414,368	+				+2.0
4,414,368	+				+0.9
4,414,374	-				-2.6
4,414,374	-				+0.5
4,414,377	-				+0.6
4,414,377	-				+0.6
4,414,392	+				-0.0
4,414,394	+				-0.4
4,414,394	+				+0.4
4,414,409	+				-0.9
4,414,409	+				-0.5
4,414,409	+				+2.1
4,414,410	-				+0.5
4,414,415	-				-1.5
4,414,422	-				-0.3
4,414,424	+				+0.8
4,414,424	+				+0.6
4,414,431	+				-1.4
4,414,431	+				-1.8
4,414,434	+				-0.7
4,414,434	+				-1.3
4,414,442	-				+0.8
4,414,448	+				+1.4
4,414,448	+				-0.2
4,414,456	-				-0.3
4,414,499	+	yjfO	b4189	0.11	-3.5
4,414,523	-	yjfO	b4189	0.18	+0.4
4,414,599	+	yjfO	b4189	0.41	-0.1
4,414,599	+	yjfO	b4189	0.41	+1.9
4,414,613	+	yjfO	b4189	0.45	-0.3
4,414,617	-	yjfO	b4189	0.46	-0.7
4,414,621	-	yjfO	b4189	0.48	+3.0
4,414,621	-	yjfO	b4189	0.48	+0.0
4,414,621	-	yjfO	b4189	0.48	-0.4
4,414,651	-	yjfO	b4189	0.57	+0.2
4,414,682	-	yjfO	b4189	0.66	-1.4
4,414,682	-	yjfO	b4189	0.66	+2.2
4,414,704	+	yjfO	b4189	0.73	+0.6
4,414,705	-	yjfO	b4189	0.73	-1.2
4,414,716	+	yjfO	b4189	0.76	-0.8
4,414,722	-	yjfO	b4189	0.78	-0.6
4,414,746	-	yjfO	b4189	0.85	+0.2
4,414,791	-				+0.6
4,414,791	-				-0.9
4,414,795	+				+0.9
4,414,800	-				+2.3
4,414,800	-				-1.7
4,414,825	-				-1.3
4,414,838	-				-0.0
4,414,838	-				-1.0
4,414,885	+				-1.5
4,414,899	+				+0.8
4,414,899	+				-0.6
4,415,030	-				+2.3
4,415,030	-				+1.6
4,415,050	-	yjfP	b4190	0.10	-0.7
4,415,058	-	yjfP	b4190	0.11	-2.4
4,415,058	-	yjfP	b4190	0.11	+0.5
4,415,058	-	yjfP	b4190	0.11	-1.1
4,415,086	-	yjfP	b4190	0.15	+0.1
4,415,103	-	yjfP	b4190	0.17	+1.8
4,415,171	+	yjfP	b4190	0.26	+0.1
4,415,171	+	yjfP	b4190	0.26	+1.0