Strain Fitness in Escherichia coli BW25113 around b2539

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
2,667,536	+	hcaE	b2538	0.35	-0.1
2,667,646	-	hcaE	b2538	0.43	-1.5
2,667,730	-	hcaE	b2538	0.50	-0.1
2,667,827	-	hcaE	b2538	0.57	-1.3
2,667,880	-	hcaE	b2538	0.61	+1.0
2,667,930	-	hcaE	b2538	0.64	-0.4
2,667,956	+	hcaE	b2538	0.66	+0.3
2,668,118	-	hcaE	b2538	0.78	+0.1
2,668,174	-	hcaE	b2538	0.82	-0.6
2,668,253	+	hcaE	b2538	0.88	-0.7
2,668,253	+	hcaE	b2538	0.88	-1.7
2,668,363	+				-0.4
2,668,539	-	hcaF	b2539	0.24	-2.2
2,668,551	-	hcaF	b2539	0.27	+0.4
2,668,551	-	hcaF	b2539	0.27	+1.1
2,668,676	+	hcaF	b2539	0.51	+1.0
2,668,676	+	hcaF	b2539	0.51	-2.3
2,668,709	+	hcaF	b2539	0.57	-2.2
2,668,715	+	hcaF	b2539	0.58	-1.5
2,668,736	-	hcaF	b2539	0.62	-0.3
2,668,759	+	hcaF	b2539	0.67	-0.5
2,668,888	-				-0.1
2,668,888	-				-0.7
2,668,925	-				+0.1
2,668,932	-				+0.3
2,668,979	-	hcaC	b2540	0.15	-1.7
2,669,083	+	hcaC	b2540	0.48	+0.2
2,669,112	-	hcaC	b2540	0.57	+0.3
2,669,166	+	hcaC	b2540	0.74	+0.7
2,669,295	+				-0.4
2,669,442	-	hcaB	b2541	0.24	-2.0
2,669,469	-				+0.3
2,669,662	+	hcaB	b2541	0.51	-0.9
2,669,678	-	hcaB	b2541	0.53	+1.9
2,669,678	-	hcaB	b2541	0.53	-1.7
2,669,716	-	hcaB	b2541	0.58	-0.4
2,669,716	-	hcaB	b2541	0.58	+1.7
2,669,827	+	hcaB	b2541	0.71	-0.1
2,669,827	+	hcaB	b2541	0.71	-1.0
2,669,835	-	hcaB	b2541	0.72	-1.1
2,669,835	-	hcaB	b2541	0.72	-0.2