Strain Fitness in Escherichia coli BW25113 around b1517

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
1,603,134	+				+0.1
1,603,408	-	lsrB	b1516	0.33	-1.0
1,603,487	-	lsrB	b1516	0.40	+0.2
1,603,659	-	lsrB	b1516	0.57	+1.2
1,603,832	+	lsrB	b1516	0.74	+1.2
1,603,832	+	lsrB	b1516	0.74	+0.0
1,603,997	+				+0.4
1,603,999	+				+0.4
1,603,999	+				+0.6
1,603,999	+				+0.8
1,604,043	+				-0.9
1,604,043	+				-0.9
1,604,044	+				-0.2
1,604,191	+				-0.4
1,604,214	+	lsrF	b1517	0.10	+0.8
1,604,214	+	lsrF	b1517	0.10	+1.5
1,604,232	+	lsrF	b1517	0.12	-0.5
1,604,238	+	lsrF	b1517	0.13	+0.5
1,604,238	+	lsrF	b1517	0.13	+1.6
1,604,246	+	lsrF	b1517	0.14	-1.7
1,604,325	-	lsrF	b1517	0.23	-0.7
1,604,325	-	lsrF	b1517	0.23	+0.0
1,604,331	-	lsrF	b1517	0.24	-0.7
1,604,404	+	lsrF	b1517	0.32	-0.8
1,604,423	+	lsrF	b1517	0.34	-1.6
1,604,433	+	lsrF	b1517	0.35	+1.9
1,604,441	-	lsrF	b1517	0.36	+0.1
1,604,441	-	lsrF	b1517	0.36	+1.6
1,604,501	-	lsrF	b1517	0.43	+1.4
1,604,527	+	lsrF	b1517	0.46	-0.9
1,604,623	-	lsrF	b1517	0.57	-1.8
1,604,636	+	lsrF	b1517	0.58	+3.8
1,604,637	+	lsrF	b1517	0.59	+0.8
1,604,637	+	lsrF	b1517	0.59	-0.8
1,604,637	+	lsrF	b1517	0.59	-1.0
1,604,712	-	lsrF	b1517	0.67	-0.1
1,604,785	+	lsrF	b1517	0.75	-0.7
1,604,866	-	lsrF	b1517	0.85	+0.3
1,604,866	-	lsrF	b1517	0.85	+1.3
1,604,871	-	lsrF	b1517	0.85	-3.1
1,605,110	+	lsrG	b1518	0.30	-1.9
1,605,118	-	lsrG	b1518	0.33	-3.6
1,605,548	-	tam	b1519	0.23	-0.3
1,605,778	-	tam	b1519	0.54	+1.2
1,605,917	+	tam	b1519	0.72	+0.4