Strain Fitness in Escherichia coli BW25113 around b1515
Experiment: 3-methyl-1-butanol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-1-butanol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,601,276 | - | lsrC | b1514 | 0.23 | -1.7 |
1,601,423 | + | lsrC | b1514 | 0.37 | -2.7 |
1,601,423 | + | lsrC | b1514 | 0.37 | +1.8 |
1,601,973 | + | -0.0 | |||
1,602,085 | + | -0.4 | |||
1,602,439 | + | lsrD | b1515 | 0.37 | +1.1 |
1,602,445 | - | lsrD | b1515 | 0.38 | -1.2 |
1,602,445 | - | lsrD | b1515 | 0.38 | +1.8 |
1,602,938 | + | lsrD | b1515 | 0.87 | -0.1 |
1,602,946 | + | lsrD | b1515 | 0.88 | -0.1 |
1,603,065 | - | -0.1 | |||
1,603,134 | + | +0.1 | |||
1,603,408 | - | lsrB | b1516 | 0.33 | -1.0 |
1,603,487 | - | lsrB | b1516 | 0.40 | +0.2 |
1,603,659 | - | lsrB | b1516 | 0.57 | +1.2 |
1,603,832 | + | lsrB | b1516 | 0.74 | +1.2 |
1,603,832 | + | lsrB | b1516 | 0.74 | +0.0 |
1,603,997 | + | +0.4 | |||
1,603,999 | + | +0.4 | |||
1,603,999 | + | +0.6 | |||
1,603,999 | + | +0.8 | |||
1,604,043 | + | -0.9 | |||
1,604,043 | + | -0.9 | |||
1,604,044 | + | -0.2 |
Or see this region's nucleotide sequence