Strain Fitness in Escherichia coli BW25113 around b1248
Experiment: 3-methyl-1-butanol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-1-butanol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
1,303,902 | + | oppF | b1247 | 0.11 | +0.2 |
1,303,914 | - | oppF | b1247 | 0.13 | +0.7 |
1,303,981 | + | oppF | b1247 | 0.19 | -2.9 |
1,303,981 | + | oppF | b1247 | 0.19 | -1.8 |
1,304,158 | + | oppF | b1247 | 0.37 | -1.6 |
1,304,294 | + | oppF | b1247 | 0.50 | +0.2 |
1,304,294 | + | oppF | b1247 | 0.50 | +1.0 |
1,304,367 | + | oppF | b1247 | 0.58 | -2.1 |
1,304,720 | + | -1.0 | |||
1,304,780 | - | -1.6 | |||
1,304,780 | - | +1.4 | |||
1,305,078 | - | b1248 | b1248 | 0.71 | +0.2 |
1,305,078 | - | b1248 | b1248 | 0.71 | -0.4 |
1,305,176 | + | +0.8 | |||
1,305,186 | + | -2.6 | |||
1,305,539 | + | cls | b1249 | 0.23 | +5.2 |
1,305,539 | + | cls | b1249 | 0.23 | +1.5 |
1,305,576 | - | cls | b1249 | 0.25 | +3.3 |
1,305,588 | - | cls | b1249 | 0.26 | +2.2 |
1,305,588 | - | cls | b1249 | 0.26 | +3.6 |
1,305,625 | - | cls | b1249 | 0.28 | +2.1 |
1,305,641 | + | cls | b1249 | 0.30 | +4.0 |
1,305,641 | + | cls | b1249 | 0.30 | +3.1 |
1,305,899 | + | cls | b1249 | 0.47 | +2.7 |
1,305,959 | + | cls | b1249 | 0.51 | +4.6 |
1,306,053 | - | cls | b1249 | 0.58 | +3.3 |
1,306,071 | - | cls | b1249 | 0.59 | +3.7 |
Or see this region's nucleotide sequence