Strain Fitness in Escherichia coli BW25113 around b0111

Experiment: 3-methyl-1-butanol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-1-butanol 1.25 vol%
118,296	+	nadC	b0109	0.61	-0.2
118,355	-	nadC	b0109	0.67	+0.5
118,355	-	nadC	b0109	0.67	+2.2
118,364	+	nadC	b0109	0.68	+0.2
118,382	-	nadC	b0109	0.70	-1.9
118,538	+	nadC	b0109	0.88	+0.1
118,623	+				+0.4
118,631	-				-0.8
118,737	+				+0.8
118,737	+				+0.3
118,781	+				+0.3
118,836	+	ampD	b0110	0.19	+2.2
118,868	+	ampD	b0110	0.24	+1.6
118,868	+	ampD	b0110	0.24	+0.5
118,904	-	ampD	b0110	0.31	-0.3
119,033	-	ampD	b0110	0.54	-0.1
119,101	+	ampD	b0110	0.67	+2.2
119,109	-	ampD	b0110	0.68	+0.5
119,109	-	ampD	b0110	0.68	+1.0
119,117	-	ampD	b0110	0.70	+0.2
119,119	+	ampD	b0110	0.70	+3.1
119,150	-	ampD	b0110	0.76	+1.5
119,150	-	ampD	b0110	0.76	+0.2
119,163	+	ampD	b0110	0.78	-0.3
119,168	-	ampD	b0110	0.79	-2.0
119,191	+	ampD	b0110	0.83	+0.9
119,191	+	ampD	b0110	0.83	-0.3
119,274	+				-1.1
119,339	+				+0.9
119,339	+				-1.5
119,499	-	ampE	b0111	0.25	+0.4
119,499	-	ampE	b0111	0.25	-1.3
119,522	+	ampE	b0111	0.28	-3.0
119,528	-	ampE	b0111	0.29	-1.1
119,555	-	ampE	b0111	0.32	-2.0
119,555	-	ampE	b0111	0.32	+0.3
119,558	-	ampE	b0111	0.32	-0.5
119,567	+	ampE	b0111	0.33	-0.1
119,567	+	ampE	b0111	0.33	-2.8
119,753	-	ampE	b0111	0.55	-2.9
119,755	-	ampE	b0111	0.55	-0.0
119,755	-	ampE	b0111	0.55	+0.9
119,756	+	ampE	b0111	0.56	+0.2
119,772	-	ampE	b0111	0.57	-2.0
119,786	+	ampE	b0111	0.59	-0.3
119,786	+	ampE	b0111	0.59	-1.3
119,799	-	ampE	b0111	0.61	+0.9
119,799	-	ampE	b0111	0.61	+0.1
119,836	-	ampE	b0111	0.65	-1.8
119,836	-	ampE	b0111	0.65	-1.6
119,915	+	ampE	b0111	0.74	+0.9
119,961	+	ampE	b0111	0.80	+1.1
119,961	+	ampE	b0111	0.80	+1.9
119,983	+	ampE	b0111	0.82	+0.4
119,985	-	ampE	b0111	0.82	-0.3
120,006	-	ampE	b0111	0.85	+0.7
120,013	-	ampE	b0111	0.86	+0.7
120,013	-	ampE	b0111	0.86	-0.7
120,014	+	ampE	b0111	0.86	+1.3
120,014	+	ampE	b0111	0.86	-1.9
120,014	+	ampE	b0111	0.86	-0.3
120,014	+	ampE	b0111	0.86	-0.0
120,037	-	ampE	b0111	0.88	-0.0
120,138	-				-0.7
120,139	+				+0.7
120,153	-				-2.3
120,155	+				+0.8
120,237	-				-0.5
120,251	-				-0.7
120,254	+				+0.5
120,266	-				-2.5
120,266	-				+1.4
120,340	-	aroP	b0112	0.12	-0.8
120,362	-	aroP	b0112	0.13	+1.5
120,377	+	aroP	b0112	0.14	-1.1
120,389	-	aroP	b0112	0.15	-0.3
120,433	+	aroP	b0112	0.19	+3.9
120,461	+	aroP	b0112	0.21	+0.2
120,484	+	aroP	b0112	0.22	-1.4
120,502	-	aroP	b0112	0.24	+1.3
120,502	-	aroP	b0112	0.24	+1.4
120,514	-	aroP	b0112	0.24	-0.5
120,514	-	aroP	b0112	0.24	-0.7
120,518	+	aroP	b0112	0.25	+0.9
120,560	-	aroP	b0112	0.28	-3.0
120,571	-	aroP	b0112	0.29	+0.5
120,611	-	aroP	b0112	0.32	-2.2
120,611	-	aroP	b0112	0.32	+1.9
120,647	-	aroP	b0112	0.34	+0.3
120,647	-	aroP	b0112	0.34	-0.1
120,675	+	aroP	b0112	0.36	-0.1
120,683	-	aroP	b0112	0.37	-1.1
120,706	+	aroP	b0112	0.38	+0.3
120,712	+	aroP	b0112	0.39	+0.3
120,712	+	aroP	b0112	0.39	-0.5
120,752	+	aroP	b0112	0.42	+2.4
120,753	-	aroP	b0112	0.42	-1.4
120,753	-	aroP	b0112	0.42	-1.8
120,847	+	aroP	b0112	0.49	-1.5
120,854	-	aroP	b0112	0.49	+0.3
120,905	-	aroP	b0112	0.53	-1.7
120,905	-	aroP	b0112	0.53	-0.9
120,956	-	aroP	b0112	0.57	-0.5
120,956	-	aroP	b0112	0.57	+0.3
121,032	-	aroP	b0112	0.62	+0.8
121,032	-	aroP	b0112	0.62	+0.4
121,032	-	aroP	b0112	0.62	+0.2
121,054	+	aroP	b0112	0.64	+0.3
121,087	+	aroP	b0112	0.66	-0.3
121,095	-	aroP	b0112	0.67	-0.7
121,128	-	aroP	b0112	0.69	+1.2
121,128	-	aroP	b0112	0.69	-0.7