Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2053

Experiment: KB with capsaicin 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with capsaicin 0.125 mg/ml
2,398,315	+				+0.6
2,398,390	+				-0.4
2,398,425	+				+0.8
2,398,434	-				-1.6
2,398,539	-				+0.7
2,398,539	-				+0.8
2,398,641	+				-1.2
2,398,664	+				-1.5
2,398,689	-				-0.9
2,398,689	-				-1.3
2,398,803	+				+0.6
2,398,804	-				+0.7
2,399,028	+				-0.8
2,399,028	+				-0.7
2,399,028	+				-0.9
2,399,028	+				+0.6
2,399,028	+				+0.7
2,399,221	-				+0.3
2,399,231	+				+0.2
2,399,232	-				+1.1
2,399,232	-				+0.6
2,399,247	+				-0.4
2,399,248	-				+0.8
2,399,368	-				-1.0
2,399,481	-		Psyr_2053	0.20	-0.4
2,399,960	+		Psyr_2053	0.72	-2.9
2,399,960	+		Psyr_2053	0.72	+0.4
2,399,960	+		Psyr_2053	0.72	+0.4
2,399,960	+		Psyr_2053	0.72	+0.7
2,399,960	+		Psyr_2053	0.72	-2.5
2,399,961	-		Psyr_2053	0.72	-1.7
2,399,961	-		Psyr_2053	0.72	-0.8
2,399,961	-		Psyr_2053	0.72	-0.4
2,399,961	-		Psyr_2053	0.72	+0.4
2,399,961	-		Psyr_2053	0.72	-0.7
2,399,961	-		Psyr_2053	0.72	+0.0
2,399,961	-		Psyr_2053	0.72	-0.8
2,400,083	+		Psyr_2053	0.85	+2.4
2,400,083	+		Psyr_2053	0.85	-1.2
2,400,083	+		Psyr_2053	0.85	-1.7
2,400,084	-		Psyr_2053	0.85	+1.6
2,400,335	-		Psyr_2054	0.13	+0.6
2,400,335	-		Psyr_2054	0.13	+0.5
2,400,335	-		Psyr_2054	0.13	+0.9
2,400,377	-		Psyr_2054	0.17	+0.9
2,400,377	-		Psyr_2054	0.17	+0.4
2,400,497	+		Psyr_2054	0.30	+0.8
2,400,497	+		Psyr_2054	0.30	+1.0
2,400,856	+		Psyr_2054	0.67	-0.1
2,401,033	+		Psyr_2054	0.86	+0.4