Strain Fitness in Pseudomonas putida KT2440 around PP_4960

Experiment: Formaldehyde 0.03125 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formaldehyde 0.03125 vol%
5,650,510	-		PP_4959	0.68	-2.3
5,650,534	+		PP_4959	0.69	+0.6
5,650,544	-		PP_4959	0.69	-0.7
5,650,544	-		PP_4959	0.69	+0.3
5,650,849	+		PP_4959	0.84	+0.0
5,650,849	+		PP_4959	0.84	+0.2
5,650,849	+				+0.2
5,650,850	-		PP_4959	0.84	-0.5
5,650,870	+		PP_4959	0.85	-0.3
5,650,995	+				+0.2
5,650,995	+				-1.8
5,650,995	+				+0.8
5,650,995	+				-1.1
5,650,995	+				-0.4
5,650,995	+				-1.4
5,650,995	+				+0.4
5,650,995	+				-0.2
5,650,996	-				-0.5
5,650,996	-				-0.8
5,650,996	-				+0.5
5,650,996	-				-0.1
5,650,996	-				-0.6
5,650,996	-				-1.8
5,650,996	-				-0.2
5,650,996	-				+0.2
5,650,996	-				+0.2
5,651,050	-				-0.0
5,651,050	-				-0.2
5,651,070	+				-0.1
5,651,070	+				+0.0
5,651,070	+				-0.2
5,651,070	+				-1.0
5,651,071	-				-0.5
5,651,071	-				-2.9
5,651,180	-				-0.2
5,651,206	+				+0.2
5,651,206	+				-0.9
5,651,206	+				+0.6
5,651,206	+				-1.0
5,651,206	+				-1.0
5,651,207	-				+0.6
5,651,207	-				-0.8
5,651,240	+				+0.2
5,651,241	-				-0.5
5,651,243	+				-0.6
5,651,243	+				+1.2
5,651,249	-				+1.0
5,651,249	-				+1.5
5,651,249	-				+1.3
5,651,249	-				+1.6
5,651,303	+				-1.4
5,651,304	-				-0.2
5,651,337	+				+0.6
5,651,395	+				-2.1
5,652,620	-		PP_4961	0.15	+1.3
5,652,710	-		PP_4961	0.42	-0.8
5,652,960	+				-0.3
5,652,961	-				+0.2
5,652,961	-				+1.0
5,653,050	+				+0.1
5,653,050	+				+0.7
5,653,050	+				-0.1
5,653,051	-				-0.0
5,653,173	-		PP_4962	0.45	-0.0