Strain Fitness in Pseudomonas putida KT2440 around PP_4715

Experiment: Formaldehyde 0.03125 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formaldehyde 0.03125 vol%
5,360,957	-		PP_t49	0.52	-1.1
5,360,973	-		PP_t49	0.73	-0.4
5,361,186	-				-0.8
5,361,186	-				-0.7
5,361,189	-				+0.7
5,361,189	-				-2.2
5,361,229	-				-1.4
5,361,229	-				-0.4
5,361,229	-				-0.1
5,361,229	-				+0.7
5,361,240	-				+0.1
5,361,291	-		PP_5706	0.23	-1.9
5,361,291	-		PP_5706	0.23	+1.3
5,361,354	-				+1.7
5,361,354	-		PP_5706	0.38	+0.5
5,361,424	-		PP_5706	0.56	+1.7
5,361,426	-		PP_5706	0.56	+1.3
5,361,442	-		PP_5706	0.60	-0.9
5,361,522	-		PP_5706	0.80	-0.3
5,361,547	-		PP_5706	0.87	-0.7