Strain Fitness in Pseudomonas putida KT2440 around PP_1612

Experiment: Formaldehyde 0.03125 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formaldehyde 0.03125 vol%
1,808,070	+		PP_1611	0.14	-0.7
1,808,070	+		PP_1611	0.14	+1.9
1,808,071	-		PP_1611	0.14	-0.4
1,808,071	-		PP_1611	0.14	-0.4
1,808,071	-		PP_1611	0.14	+0.2
1,808,071	-		PP_1611	0.14	+0.2
1,808,104	-		PP_1611	0.18	+0.3
1,808,154	+		PP_1611	0.24	+0.1
1,808,155	-		PP_1611	0.24	+1.1
1,808,155	-		PP_1611	0.24	+0.6
1,808,273	-		PP_1611	0.38	+0.2
1,808,273	-		PP_1611	0.38	-0.2
1,808,273	-		PP_1611	0.38	-0.8
1,808,440	+		PP_1611	0.58	+0.2
1,808,441	-		PP_1611	0.58	+0.3
1,808,441	-		PP_1611	0.58	+0.7
1,808,469	+		PP_1611	0.61	-0.3
1,808,717	+				+0.5
1,808,718	-				-0.5
1,808,782	+				-1.1
1,808,793	+				-1.1
1,808,908	+				+0.2
1,808,908	+				+0.3
1,808,913	+				-0.9
1,808,913	+				-0.8
1,808,913	+				+1.6
1,810,251	+				-1.3
1,810,251	+				+0.4
1,810,251	+				+0.7
1,810,274	+				+0.3
1,810,299	+				+0.1
1,810,303	+				+1.1
1,810,306	+				+0.6
1,810,369	+				-0.4
1,810,369	+				+0.1
1,810,369	+				+0.6
1,810,376	+				-0.7