Experiment: D-Glucose 20mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1622 and Echvi_1623 are separated by 133 nucleotides Echvi_1623 and Echvi_1624 are separated by 6 nucleotides
Echvi_1622: Echvi_1622 - SusD family., at 1,870,260 to 1,871,774
_1622
Echvi_1623: Echvi_1623 - Glycosyl hydrolases family 43., at 1,871,908 to 1,872,981
_1623
Echvi_1624: Echvi_1624 - Glycogen debranching enzyme, at 1,872,988 to 1,876,629
_1624
Position (kb)
1871
1872
1873 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1870.924 kb on + strand, within Echvi_1622 at 1870.925 kb on - strand, within Echvi_1622 at 1870.925 kb on - strand, within Echvi_1622 at 1870.926 kb on + strand, within Echvi_1622 at 1870.926 kb on + strand, within Echvi_1622 at 1870.926 kb on + strand, within Echvi_1622 at 1870.926 kb on + strand, within Echvi_1622 at 1870.926 kb on + strand, within Echvi_1622 at 1870.926 kb on + strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1870.927 kb on - strand, within Echvi_1622 at 1871.053 kb on - strand, within Echvi_1622 at 1871.053 kb on - strand, within Echvi_1622 at 1871.061 kb on - strand, within Echvi_1622 at 1871.070 kb on + strand, within Echvi_1622 at 1871.076 kb on - strand, within Echvi_1622 at 1871.117 kb on - strand, within Echvi_1622 at 1871.145 kb on + strand, within Echvi_1622 at 1871.145 kb on + strand, within Echvi_1622 at 1871.145 kb on + strand, within Echvi_1622 at 1871.145 kb on + strand, within Echvi_1622 at 1871.155 kb on - strand, within Echvi_1622 at 1871.302 kb on - strand, within Echvi_1622 at 1871.302 kb on - strand, within Echvi_1622 at 1871.304 kb on - strand, within Echvi_1622 at 1871.416 kb on - strand, within Echvi_1622 at 1871.544 kb on + strand, within Echvi_1622 at 1871.544 kb on + strand, within Echvi_1622 at 1871.544 kb on + strand, within Echvi_1622 at 1871.545 kb on - strand, within Echvi_1622 at 1871.545 kb on - strand, within Echvi_1622 at 1871.709 kb on + strand at 1871.738 kb on - strand at 1871.752 kb on - strand at 1871.773 kb on - strand at 1871.773 kb on - strand at 1871.773 kb on - strand at 1871.786 kb on - strand at 1871.789 kb on - strand at 1871.793 kb on - strand at 1871.803 kb on + strand at 1871.803 kb on + strand at 1871.804 kb on - strand at 1871.804 kb on - strand at 1871.806 kb on + strand at 1871.807 kb on - strand at 1871.807 kb on - strand at 1871.811 kb on + strand at 1871.843 kb on + strand at 1871.908 kb on - strand at 1871.932 kb on + strand at 1871.935 kb on - strand at 1872.062 kb on - strand, within Echvi_1623 at 1872.062 kb on - strand, within Echvi_1623 at 1872.086 kb on - strand, within Echvi_1623 at 1872.205 kb on + strand, within Echvi_1623 at 1872.207 kb on + strand, within Echvi_1623 at 1872.207 kb on + strand, within Echvi_1623 at 1872.314 kb on - strand, within Echvi_1623 at 1872.503 kb on - strand, within Echvi_1623 at 1872.517 kb on - strand, within Echvi_1623 at 1872.526 kb on + strand, within Echvi_1623 at 1872.526 kb on + strand, within Echvi_1623 at 1872.527 kb on - strand, within Echvi_1623 at 1872.527 kb on - strand, within Echvi_1623 at 1872.536 kb on - strand, within Echvi_1623 at 1872.538 kb on - strand, within Echvi_1623 at 1872.613 kb on + strand, within Echvi_1623 at 1872.614 kb on - strand, within Echvi_1623 at 1872.614 kb on - strand, within Echvi_1623 at 1872.614 kb on - strand, within Echvi_1623 at 1872.614 kb on - strand, within Echvi_1623 at 1872.751 kb on + strand, within Echvi_1623 at 1872.752 kb on - strand, within Echvi_1623 at 1872.802 kb on + strand, within Echvi_1623 at 1872.802 kb on + strand, within Echvi_1623 at 1872.806 kb on - strand, within Echvi_1623 at 1872.820 kb on + strand, within Echvi_1623 at 1872.821 kb on - strand, within Echvi_1623 at 1872.821 kb on - strand, within Echvi_1623 at 1872.826 kb on - strand, within Echvi_1623 at 1872.859 kb on + strand, within Echvi_1623 at 1872.860 kb on - strand, within Echvi_1623 at 1872.892 kb on - strand at 1872.959 kb on - strand at 1872.963 kb on - strand at 1872.963 kb on - strand at 1872.963 kb on - strand at 1872.963 kb on - strand at 1872.966 kb on + strand at 1872.991 kb on + strand at 1872.991 kb on + strand at 1872.992 kb on - strand at 1872.992 kb on - strand at 1872.992 kb on - strand at 1873.078 kb on + strand at 1873.095 kb on + strand at 1873.108 kb on + strand at 1873.109 kb on - strand at 1873.172 kb on - strand at 1873.228 kb on + strand at 1873.229 kb on - strand at 1873.254 kb on + strand at 1873.255 kb on - strand at 1873.271 kb on + strand at 1873.322 kb on - strand at 1873.322 kb on - strand at 1873.342 kb on + strand at 1873.342 kb on + strand at 1873.342 kb on + strand at 1873.342 kb on + strand at 1873.343 kb on - strand at 1873.343 kb on - strand at 1873.343 kb on - strand at 1873.343 kb on - strand at 1873.343 kb on - strand at 1873.391 kb on + strand, within Echvi_1624 at 1873.391 kb on + strand, within Echvi_1624 at 1873.400 kb on + strand, within Echvi_1624 at 1873.400 kb on + strand, within Echvi_1624 at 1873.401 kb on - strand, within Echvi_1624 at 1873.401 kb on - strand, within Echvi_1624 at 1873.401 kb on - strand, within Echvi_1624 at 1873.548 kb on + strand, within Echvi_1624 at 1873.549 kb on - strand, within Echvi_1624 at 1873.549 kb on - strand, within Echvi_1624 at 1873.549 kb on - strand, within Echvi_1624 at 1873.549 kb on - strand, within Echvi_1624 at 1873.604 kb on + strand, within Echvi_1624 at 1873.604 kb on + strand, within Echvi_1624 at 1873.647 kb on + strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.648 kb on - strand, within Echvi_1624 at 1873.680 kb on + strand, within Echvi_1624 at 1873.681 kb on - strand, within Echvi_1624 at 1873.739 kb on + strand, within Echvi_1624 at 1873.761 kb on + strand, within Echvi_1624 at 1873.762 kb on - strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.789 kb on + strand, within Echvi_1624 at 1873.790 kb on - strand, within Echvi_1624 at 1873.790 kb on - strand, within Echvi_1624 at 1873.790 kb on - strand, within Echvi_1624 at 1873.790 kb on - strand, within Echvi_1624 at 1873.849 kb on + strand, within Echvi_1624 at 1873.916 kb on - strand, within Echvi_1624 at 1873.916 kb on - strand, within Echvi_1624 at 1873.917 kb on + strand, within Echvi_1624 at 1873.918 kb on - strand, within Echvi_1624 at 1873.918 kb on - strand, within Echvi_1624 at 1873.919 kb on + strand, within Echvi_1624 at 1873.961 kb on + strand, within Echvi_1624 at 1873.963 kb on + strand, within Echvi_1624 at 1873.963 kb on + strand, within Echvi_1624 at 1873.963 kb on + strand, within Echvi_1624 at 1873.963 kb on + strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.964 kb on - strand, within Echvi_1624 at 1873.978 kb on + strand, within Echvi_1624
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 20mM (C) remove 1,870,924 + Echvi_1622 0.44 -1.4 1,870,925 - Echvi_1622 0.44 +0.5 1,870,925 - Echvi_1622 0.44 +0.8 1,870,926 + Echvi_1622 0.44 -0.8 1,870,926 + Echvi_1622 0.44 -0.8 1,870,926 + Echvi_1622 0.44 -2.2 1,870,926 + Echvi_1622 0.44 -0.6 1,870,926 + Echvi_1622 0.44 -0.6 1,870,926 + Echvi_1622 0.44 -1.0 1,870,927 - Echvi_1622 0.44 +0.2 1,870,927 - Echvi_1622 0.44 +2.1 1,870,927 - Echvi_1622 0.44 +1.2 1,870,927 - Echvi_1622 0.44 +0.4 1,870,927 - Echvi_1622 0.44 -1.4 1,870,927 - Echvi_1622 0.44 +0.4 1,870,927 - Echvi_1622 0.44 +0.6 1,871,053 - Echvi_1622 0.52 +1.0 1,871,053 - Echvi_1622 0.52 -1.0 1,871,061 - Echvi_1622 0.53 -0.3 1,871,070 + Echvi_1622 0.53 -1.0 1,871,076 - Echvi_1622 0.54 -0.8 1,871,117 - Echvi_1622 0.57 -0.2 1,871,145 + Echvi_1622 0.58 -0.2 1,871,145 + Echvi_1622 0.58 +0.5 1,871,145 + Echvi_1622 0.58 -0.1 1,871,145 + Echvi_1622 0.58 -0.9 1,871,155 - Echvi_1622 0.59 +0.2 1,871,302 - Echvi_1622 0.69 -0.1 1,871,302 - Echvi_1622 0.69 +3.5 1,871,304 - Echvi_1622 0.69 +0.2 1,871,416 - Echvi_1622 0.76 -0.1 1,871,544 + Echvi_1622 0.85 -0.3 1,871,544 + Echvi_1622 0.85 -0.2 1,871,544 + Echvi_1622 0.85 -0.3 1,871,545 - Echvi_1622 0.85 +0.0 1,871,545 - Echvi_1622 0.85 +2.9 1,871,709 + -0.2 1,871,738 - -1.2 1,871,752 - +0.4 1,871,773 - +0.3 1,871,773 - -0.6 1,871,773 - -1.2 1,871,786 - +1.3 1,871,789 - -1.0 1,871,793 - -0.6 1,871,803 + -1.0 1,871,803 + +1.4 1,871,804 - -0.5 1,871,804 - +2.4 1,871,806 + +0.9 1,871,807 - -0.2 1,871,807 - -0.1 1,871,811 + +0.8 1,871,843 + +0.8 1,871,908 - +1.0 1,871,932 + -0.4 1,871,935 - -0.0 1,872,062 - Echvi_1623 0.14 -0.4 1,872,062 - Echvi_1623 0.14 +1.6 1,872,086 - Echvi_1623 0.17 +0.9 1,872,205 + Echvi_1623 0.28 -0.6 1,872,207 + Echvi_1623 0.28 -0.1 1,872,207 + Echvi_1623 0.28 -0.6 1,872,314 - Echvi_1623 0.38 +0.1 1,872,503 - Echvi_1623 0.55 -0.1 1,872,517 - Echvi_1623 0.57 +0.0 1,872,526 + Echvi_1623 0.58 -0.9 1,872,526 + Echvi_1623 0.58 -3.2 1,872,527 - Echvi_1623 0.58 +0.2 1,872,527 - Echvi_1623 0.58 +1.9 1,872,536 - Echvi_1623 0.58 -1.5 1,872,538 - Echvi_1623 0.59 -0.1 1,872,613 + Echvi_1623 0.66 -2.0 1,872,614 - Echvi_1623 0.66 +0.8 1,872,614 - Echvi_1623 0.66 +0.4 1,872,614 - Echvi_1623 0.66 -0.5 1,872,614 - Echvi_1623 0.66 -0.9 1,872,751 + Echvi_1623 0.78 -0.0 1,872,752 - Echvi_1623 0.79 -1.4 1,872,802 + Echvi_1623 0.83 -0.8 1,872,802 + Echvi_1623 0.83 -0.6 1,872,806 - Echvi_1623 0.84 +0.1 1,872,820 + Echvi_1623 0.85 -1.0 1,872,821 - Echvi_1623 0.85 -0.8 1,872,821 - Echvi_1623 0.85 +0.9 1,872,826 - Echvi_1623 0.85 -2.2 1,872,859 + Echvi_1623 0.89 -0.6 1,872,860 - Echvi_1623 0.89 -0.6 1,872,892 - +0.7 1,872,959 - +0.5 1,872,963 - -0.4 1,872,963 - +1.6 1,872,963 - +1.1 1,872,963 - +0.6 1,872,966 + -0.6 1,872,991 + +0.1 1,872,991 + +1.0 1,872,992 - +1.7 1,872,992 - +0.4 1,872,992 - +0.9 1,873,078 + -0.3 1,873,095 + -0.3 1,873,108 + -0.6 1,873,109 - -1.3 1,873,172 - +1.1 1,873,228 + +0.1 1,873,229 - +0.3 1,873,254 + -1.8 1,873,255 - -0.3 1,873,271 + -3.0 1,873,322 - +0.5 1,873,322 - -1.0 1,873,342 + +1.8 1,873,342 + -0.6 1,873,342 + -1.0 1,873,342 + -0.3 1,873,343 - +0.9 1,873,343 - +0.6 1,873,343 - +1.2 1,873,343 - +0.0 1,873,343 - +2.9 1,873,391 + Echvi_1624 0.11 -0.2 1,873,391 + Echvi_1624 0.11 +1.1 1,873,400 + Echvi_1624 0.11 -1.8 1,873,400 + Echvi_1624 0.11 -0.6 1,873,401 - Echvi_1624 0.11 +0.3 1,873,401 - Echvi_1624 0.11 -1.2 1,873,401 - Echvi_1624 0.11 +0.6 1,873,548 + Echvi_1624 0.15 +0.1 1,873,549 - Echvi_1624 0.15 +3.5 1,873,549 - Echvi_1624 0.15 +0.7 1,873,549 - Echvi_1624 0.15 +0.0 1,873,549 - Echvi_1624 0.15 -0.7 1,873,604 + Echvi_1624 0.17 +0.4 1,873,604 + Echvi_1624 0.17 +0.1 1,873,647 + Echvi_1624 0.18 -2.5 1,873,648 - Echvi_1624 0.18 -0.9 1,873,648 - Echvi_1624 0.18 -0.4 1,873,648 - Echvi_1624 0.18 -0.2 1,873,648 - Echvi_1624 0.18 -0.1 1,873,648 - Echvi_1624 0.18 +2.4 1,873,648 - Echvi_1624 0.18 -0.4 1,873,648 - Echvi_1624 0.18 -0.1 1,873,648 - Echvi_1624 0.18 -1.0 1,873,680 + Echvi_1624 0.19 -0.1 1,873,681 - Echvi_1624 0.19 +0.0 1,873,739 + Echvi_1624 0.21 +2.5 1,873,761 + Echvi_1624 0.21 -0.4 1,873,762 - Echvi_1624 0.21 +1.2 1,873,789 + Echvi_1624 0.22 +0.6 1,873,789 + Echvi_1624 0.22 -0.2 1,873,789 + Echvi_1624 0.22 +0.4 1,873,789 + Echvi_1624 0.22 -0.4 1,873,789 + Echvi_1624 0.22 +0.9 1,873,789 + Echvi_1624 0.22 +0.4 1,873,789 + Echvi_1624 0.22 -0.5 1,873,789 + Echvi_1624 0.22 +0.5 1,873,789 + Echvi_1624 0.22 -1.0 1,873,790 - Echvi_1624 0.22 +2.4 1,873,790 - Echvi_1624 0.22 -1.0 1,873,790 - Echvi_1624 0.22 -0.2 1,873,790 - Echvi_1624 0.22 +0.9 1,873,849 + Echvi_1624 0.24 -0.4 1,873,916 - Echvi_1624 0.25 -1.0 1,873,916 - Echvi_1624 0.25 +0.0 1,873,917 + Echvi_1624 0.26 +1.1 1,873,918 - Echvi_1624 0.26 +1.3 1,873,918 - Echvi_1624 0.26 -0.9 1,873,919 + Echvi_1624 0.26 +1.1 1,873,961 + Echvi_1624 0.27 +1.2 1,873,963 + Echvi_1624 0.27 -0.0 1,873,963 + Echvi_1624 0.27 -0.4 1,873,963 + Echvi_1624 0.27 +1.4 1,873,963 + Echvi_1624 0.27 -0.4 1,873,964 - Echvi_1624 0.27 +1.0 1,873,964 - Echvi_1624 0.27 +0.1 1,873,964 - Echvi_1624 0.27 -2.0 1,873,964 - Echvi_1624 0.27 -0.1 1,873,964 - Echvi_1624 0.27 +0.4 1,873,964 - Echvi_1624 0.27 -1.1 1,873,964 - Echvi_1624 0.27 +0.8 1,873,964 - Echvi_1624 0.27 -0.6 1,873,964 - Echvi_1624 0.27 +1.5 1,873,964 - Echvi_1624 0.27 -2.2 1,873,978 + Echvi_1624 0.27 +0.9
Or see this region's nucleotide sequence