Experiment: 3-methyl-2-butenol 0.31 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeeN and asnW are separated by 452 nucleotides asnW and yeeO are separated by 100 nucleotides
b1983: yeeN - hypothetical protein (NCBI), at 2,054,882 to 2,055,598
yeeN
b1984: asnW - tRNA-Asn (NCBI), at 2,056,051 to 2,056,126
asnW
b1985: yeeO - predicted multidrug efflux system (RefSeq), at 2,056,227 to 2,057,714
yeeO
Position (kb)
2056
2057 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2055.129 kb on + strand, within yeeN at 2055.130 kb on + strand, within yeeN at 2055.139 kb on + strand, within yeeN at 2055.146 kb on + strand, within yeeN at 2055.250 kb on + strand, within yeeN at 2055.262 kb on + strand, within yeeN at 2055.262 kb on + strand, within yeeN at 2055.264 kb on + strand, within yeeN at 2055.264 kb on + strand, within yeeN at 2055.264 kb on + strand, within yeeN at 2055.267 kb on + strand, within yeeN at 2055.277 kb on + strand, within yeeN at 2055.309 kb on + strand, within yeeN at 2055.309 kb on + strand, within yeeN at 2055.354 kb on + strand, within yeeN at 2055.354 kb on + strand, within yeeN at 2055.354 kb on + strand, within yeeN at 2055.364 kb on + strand, within yeeN at 2055.364 kb on + strand, within yeeN at 2055.364 kb on + strand, within yeeN at 2055.412 kb on + strand, within yeeN at 2055.420 kb on - strand, within yeeN at 2055.430 kb on + strand, within yeeN at 2055.430 kb on + strand, within yeeN at 2055.443 kb on + strand, within yeeN at 2055.443 kb on + strand, within yeeN at 2055.454 kb on + strand, within yeeN at 2055.487 kb on + strand, within yeeN at 2055.502 kb on + strand, within yeeN at 2055.522 kb on + strand, within yeeN at 2055.543 kb on + strand at 2055.543 kb on + strand at 2055.543 kb on + strand at 2055.782 kb on - strand at 2055.852 kb on - strand at 2055.857 kb on - strand at 2055.857 kb on - strand at 2055.877 kb on - strand at 2055.887 kb on + strand at 2055.889 kb on + strand at 2055.895 kb on - strand at 2055.895 kb on - strand at 2055.895 kb on - strand at 2055.897 kb on - strand at 2055.930 kb on - strand at 2056.031 kb on - strand at 2056.031 kb on - strand at 2056.032 kb on - strand at 2056.075 kb on - strand, within asnW at 2056.312 kb on - strand at 2056.322 kb on - strand at 2056.322 kb on - strand at 2056.326 kb on + strand at 2056.445 kb on + strand, within yeeO at 2056.480 kb on + strand, within yeeO at 2056.557 kb on + strand, within yeeO at 2056.702 kb on - strand, within yeeO at 2056.725 kb on - strand, within yeeO at 2056.725 kb on - strand, within yeeO at 2056.738 kb on - strand, within yeeO at 2056.738 kb on - strand, within yeeO at 2056.750 kb on - strand, within yeeO at 2056.758 kb on + strand, within yeeO at 2056.758 kb on + strand, within yeeO at 2056.807 kb on - strand, within yeeO at 2056.857 kb on + strand, within yeeO at 2056.857 kb on + strand, within yeeO at 2056.880 kb on + strand, within yeeO at 2056.893 kb on + strand, within yeeO at 2056.895 kb on + strand, within yeeO at 2056.895 kb on + strand, within yeeO at 2057.027 kb on + strand, within yeeO at 2057.027 kb on + strand, within yeeO at 2057.033 kb on + strand, within yeeO at 2057.035 kb on - strand, within yeeO at 2057.120 kb on - strand, within yeeO
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-2-butenol 0.31 vol% remove 2,055,129 + yeeN b1983 0.34 +1.1 2,055,130 + yeeN b1983 0.35 +0.8 2,055,139 + yeeN b1983 0.36 -0.3 2,055,146 + yeeN b1983 0.37 -0.4 2,055,250 + yeeN b1983 0.51 -0.1 2,055,262 + yeeN b1983 0.53 -0.8 2,055,262 + yeeN b1983 0.53 +0.3 2,055,264 + yeeN b1983 0.53 -0.9 2,055,264 + yeeN b1983 0.53 -1.1 2,055,264 + yeeN b1983 0.53 +0.2 2,055,267 + yeeN b1983 0.54 +0.7 2,055,277 + yeeN b1983 0.55 -0.0 2,055,309 + yeeN b1983 0.60 -0.2 2,055,309 + yeeN b1983 0.60 -0.9 2,055,354 + yeeN b1983 0.66 +0.4 2,055,354 + yeeN b1983 0.66 -0.0 2,055,354 + yeeN b1983 0.66 -0.1 2,055,364 + yeeN b1983 0.67 -0.2 2,055,364 + yeeN b1983 0.67 -0.1 2,055,364 + yeeN b1983 0.67 -0.2 2,055,412 + yeeN b1983 0.74 -0.0 2,055,420 - yeeN b1983 0.75 +0.1 2,055,430 + yeeN b1983 0.76 +0.4 2,055,430 + yeeN b1983 0.76 -0.6 2,055,443 + yeeN b1983 0.78 -3.2 2,055,443 + yeeN b1983 0.78 +0.7 2,055,454 + yeeN b1983 0.80 +1.0 2,055,487 + yeeN b1983 0.84 -0.1 2,055,502 + yeeN b1983 0.86 -0.2 2,055,522 + yeeN b1983 0.89 -0.2 2,055,543 + -0.2 2,055,543 + +0.1 2,055,543 + +0.6 2,055,782 - +1.6 2,055,852 - +1.1 2,055,857 - -0.6 2,055,857 - +0.5 2,055,877 - +0.3 2,055,887 + -0.7 2,055,889 + -0.4 2,055,895 - +0.5 2,055,895 - -0.6 2,055,895 - +0.0 2,055,897 - -1.8 2,055,930 - -0.5 2,056,031 - -0.5 2,056,031 - -0.4 2,056,032 - -1.6 2,056,075 - asnW b1984 0.32 -0.8 2,056,312 - +0.1 2,056,322 - +0.1 2,056,322 - -0.5 2,056,326 + -0.3 2,056,445 + yeeO b1985 0.15 -0.5 2,056,480 + yeeO b1985 0.17 +0.3 2,056,557 + yeeO b1985 0.22 +0.6 2,056,702 - yeeO b1985 0.32 -1.0 2,056,725 - yeeO b1985 0.33 -0.4 2,056,725 - yeeO b1985 0.33 +1.6 2,056,738 - yeeO b1985 0.34 +1.6 2,056,738 - yeeO b1985 0.34 +0.3 2,056,750 - yeeO b1985 0.35 +0.7 2,056,758 + yeeO b1985 0.36 -1.5 2,056,758 + yeeO b1985 0.36 -1.5 2,056,807 - yeeO b1985 0.39 +0.1 2,056,857 + yeeO b1985 0.42 -1.0 2,056,857 + yeeO b1985 0.42 -1.0 2,056,880 + yeeO b1985 0.44 -1.2 2,056,893 + yeeO b1985 0.45 +0.9 2,056,895 + yeeO b1985 0.45 -0.5 2,056,895 + yeeO b1985 0.45 +0.7 2,057,027 + yeeO b1985 0.54 -0.1 2,057,027 + yeeO b1985 0.54 -0.4 2,057,033 + yeeO b1985 0.54 +0.2 2,057,035 - yeeO b1985 0.54 -1.1 2,057,120 - yeeO b1985 0.60 -2.3
Or see this region's nucleotide sequence