Strain Fitness in Escherichia coli BW25113 around b3551

Experiment: 3-methyl-2-butenol 0.31 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-2-butenol 0.31 vol%
3,711,091	+				-0.1
3,711,123	+				-0.1
3,711,137	+				+1.1
3,711,137	+				+0.1
3,711,155	-				+0.1
3,711,162	+				+0.1
3,711,162	+				+0.2
3,711,183	+	tag	b3549	0.12	-0.3
3,711,183	+	tag	b3549	0.12	+0.5
3,711,229	+	tag	b3549	0.20	+0.1
3,711,298	-	tag	b3549	0.32	+0.4
3,711,298	-				+1.4
3,711,352	+	tag	b3549	0.42	-0.4
3,711,357	-	tag	b3549	0.43	-0.1
3,711,357	-	tag	b3549	0.43	-0.2
3,711,360	-	tag	b3549	0.43	-0.1
3,711,360	-	tag	b3549	0.43	+0.6
3,711,421	-	tag	b3549	0.54	-0.3
3,711,433	-	tag	b3549	0.56	-0.9
3,711,490	-	tag	b3549	0.66	+0.9
3,711,498	+	tag	b3549	0.68	+2.0
3,711,500	-	tag	b3549	0.68	+0.2
3,711,534	-	tag	b3549	0.74	-0.1
3,711,534	-	tag	b3549	0.74	+0.7
3,711,613	-	tag	b3549	0.88	-0.3
3,711,613	-	tag	b3549	0.88	+0.1
3,711,617	+	tag	b3549	0.89	-0.2
3,711,617	+	tag	b3549	0.89	+0.1
3,711,617	+	tag	b3549	0.89	-0.5
3,711,625	-				+0.4
3,711,635	-				+0.1
3,711,645	-				-0.1
3,711,645	-				-0.3
3,711,648	+				-0.3
3,711,702	-				-0.6
3,711,739	-	yiaC	b3550	0.15	+0.0
3,711,751	+	yiaC	b3550	0.17	-0.1
3,711,751	+	yiaC	b3550	0.17	+0.3
3,711,786	-	yiaC	b3550	0.25	-0.7
3,711,873	-	yiaC	b3550	0.45	-0.0
3,711,873	-	yiaC	b3550	0.45	+0.1
3,711,873	-	yiaC	b3550	0.45	-0.3
3,711,874	-	yiaC	b3550	0.45	+0.4
3,711,923	-	yiaC	b3550	0.56	+0.9
3,711,946	+	yiaC	b3550	0.61	-0.3
3,711,946	+	yiaC	b3550	0.61	-0.5
3,711,949	+	yiaC	b3550	0.62	-0.6
3,711,954	-	yiaC	b3550	0.63	+1.2
3,711,954	-	yiaC	b3550	0.63	+0.7
3,711,970	+	yiaC	b3550	0.67	+0.6
3,711,973	-	yiaC	b3550	0.68	+0.1
3,712,058	+	yiaC	b3550	0.87	+0.4
3,712,073	+				+0.3
3,712,116	-				-0.6
3,712,118	-				-0.7
3,712,118	-				-0.8
3,712,135	+				-0.6
3,712,135	+				+0.0
3,712,174	+				-0.3
3,712,191	+				+0.2
3,712,191	+				+0.1
3,712,236	-				+0.2
3,712,236	-				-0.6
3,712,305	+				+0.3
3,712,320	+	bisC	b3551	0.10	+0.3
3,712,320	+	bisC	b3551	0.10	-0.5
3,712,349	+	bisC	b3551	0.11	-0.4
3,712,357	-	bisC	b3551	0.12	+0.3
3,712,364	+	bisC	b3551	0.12	+0.6
3,712,364	+	bisC	b3551	0.12	+1.1
3,712,374	-	bisC	b3551	0.12	+0.6
3,712,374	-	bisC	b3551	0.12	-0.6
3,712,382	+	bisC	b3551	0.13	-0.2
3,712,405	-				+0.2
3,712,408	+	bisC	b3551	0.14	-0.0
3,712,411	-	bisC	b3551	0.14	+2.0
3,712,418	+	bisC	b3551	0.14	+0.3
3,712,441	+	bisC	b3551	0.15	-0.1
3,712,459	+	bisC	b3551	0.16	-0.5
3,712,462	-	bisC	b3551	0.16	+0.0
3,712,462	-	bisC	b3551	0.16	+0.1
3,712,487	+	bisC	b3551	0.17	-0.5
3,712,494	-	bisC	b3551	0.18	-0.5
3,712,502	-	bisC	b3551	0.18	-0.3
3,712,502	-	bisC	b3551	0.18	-0.6
3,712,564	-	bisC	b3551	0.21	+0.2
3,712,565	-	bisC	b3551	0.21	+0.2
3,712,566	+	bisC	b3551	0.21	+0.2
3,712,566	+	bisC	b3551	0.21	+0.3
3,712,574	-	bisC	b3551	0.21	+0.6
3,712,579	-	bisC	b3551	0.21	-0.5
3,712,584	-	bisC	b3551	0.21	+0.3
3,712,595	+	bisC	b3551	0.22	+0.0
3,712,879	-	bisC	b3551	0.34	+0.0
3,712,895	+	bisC	b3551	0.35	-0.8
3,712,970	+	bisC	b3551	0.38	+1.3
3,712,970	+	bisC	b3551	0.38	+0.4
3,712,970	+	bisC	b3551	0.38	+0.7
3,713,000	-	bisC	b3551	0.39	+2.0
3,713,018	+	bisC	b3551	0.40	+0.6
3,713,026	-	bisC	b3551	0.40	-1.0
3,713,042	+	bisC	b3551	0.41	+1.4
3,713,110	-	bisC	b3551	0.44	+1.4
3,713,110	-	bisC	b3551	0.44	-0.3
3,713,115	+	bisC	b3551	0.44	+0.7
3,713,115	+	bisC	b3551	0.44	+0.0
3,713,181	-	bisC	b3551	0.47	+0.2
3,713,185	+	bisC	b3551	0.47	-0.2
3,713,187	+	bisC	b3551	0.47	+0.6
3,713,239	+	bisC	b3551	0.49	+1.0
3,713,278	-	bisC	b3551	0.51	-0.0
3,713,290	+	bisC	b3551	0.52	+2.6
3,713,290	+	bisC	b3551	0.52	-0.0
3,713,321	-	bisC	b3551	0.53	-0.3
3,713,321	-	bisC	b3551	0.53	-0.6
3,713,322	-	bisC	b3551	0.53	-0.3
3,713,322	-	bisC	b3551	0.53	+0.6
3,713,452	+	bisC	b3551	0.59	+0.4
3,713,542	+	bisC	b3551	0.62	+1.0
3,713,542	+	bisC	b3551	0.62	-0.3
3,713,605	-	bisC	b3551	0.65	+0.5
3,713,606	-	bisC	b3551	0.65	-0.4
3,713,606	-	bisC	b3551	0.65	+1.1
3,713,657	-	bisC	b3551	0.67	-0.3
3,713,692	-	bisC	b3551	0.69	-1.6
3,713,764	-	bisC	b3551	0.72	-1.1
3,713,764	-	bisC	b3551	0.72	+0.3
3,713,787	-	bisC	b3551	0.73	+0.3
3,713,795	-	bisC	b3551	0.73	+0.7
3,713,809	-	bisC	b3551	0.74	+0.3
3,713,827	-	bisC	b3551	0.75	-0.7
3,713,827	-	bisC	b3551	0.75	-1.1
3,713,851	-	bisC	b3551	0.76	-0.1
3,713,871	-	bisC	b3551	0.77	+0.4
3,713,925	+	bisC	b3551	0.79	-0.3
3,713,955	-	bisC	b3551	0.80	-0.1
3,713,955	-	bisC	b3551	0.80	+1.4
3,713,996	+	bisC	b3551	0.82	+0.8
3,714,002	-	bisC	b3551	0.82	+0.1
3,714,004	-	bisC	b3551	0.82	+0.6
3,714,035	-	bisC	b3551	0.84	+0.1
3,714,041	+	bisC	b3551	0.84	-0.3
3,714,091	-	bisC	b3551	0.86	+0.6
3,714,155	+	bisC	b3551	0.89	-0.7
3,714,161	-	bisC	b3551	0.89	+0.2
3,714,161	-	bisC	b3551	0.89	-0.1
3,714,163	-	bisC	b3551	0.89	-0.4
3,714,191	-				+0.9
3,714,191	-				+0.3
3,714,271	+				-0.4
3,714,305	+				-0.5
3,714,313	-				+0.2
3,714,313	-				-0.2
3,714,350	+				-2.1
3,714,426	+				-0.3
3,714,426	+				+0.2
3,714,426	+				+1.2
3,714,434	-				-0.7
3,714,443	+				-0.4
3,714,443	+				-0.8
3,714,492	-				-0.1
3,714,492	-				-0.1
3,714,511	+				+0.2
3,714,511	+				+0.6
3,714,519	-				+0.8
3,714,519	-				-0.3
3,714,564	-				+0.3
3,714,594	-				-0.2
3,714,610	+				+0.8
3,714,610	+				-1.0
3,714,617	+				+0.6
3,714,617	+				+0.4
3,714,621	+				+0.4
3,714,621	+				+0.5
3,714,621	+				+0.4
3,714,629	+				+0.3
3,714,629	+				+0.1
3,714,639	-	yiaD	b3552	0.10	+0.1
3,714,641	+	yiaD	b3552	0.11	-0.6
3,714,641	+	yiaD	b3552	0.11	-0.5
3,714,643	-	yiaD	b3552	0.11	+0.0
3,714,643	-	yiaD	b3552	0.11	+0.4
3,714,649	-	yiaD	b3552	0.12	-0.1
3,714,680	+	yiaD	b3552	0.17	-0.6
3,714,687	+	yiaD	b3552	0.18	+0.8
3,714,694	+	yiaD	b3552	0.19	+0.1
3,714,695	-	yiaD	b3552	0.19	-0.5
3,714,710	+	yiaD	b3552	0.21	+0.0
3,714,723	+	yiaD	b3552	0.23	-0.5
3,714,733	-	yiaD	b3552	0.25	-0.6
3,714,733	-	yiaD	b3552	0.25	-0.3
3,714,754	-	yiaD	b3552	0.28	-1.8
3,714,754	-	yiaD	b3552	0.28	+0.1
3,714,766	+	yiaD	b3552	0.30	-0.8
3,714,791	-	yiaD	b3552	0.33	-0.8
3,714,823	+	yiaD	b3552	0.38	-0.5
3,714,856	+	yiaD	b3552	0.43	+0.1
3,714,863	-	yiaD	b3552	0.44	+0.0
3,714,891	-	yiaD	b3552	0.49	+0.1
3,714,905	+	yiaD	b3552	0.51	-0.1
3,714,913	-	yiaD	b3552	0.52	-0.2
3,714,948	+	yiaD	b3552	0.57	-0.3
3,714,957	+	yiaD	b3552	0.59	-0.4
3,714,957	+	yiaD	b3552	0.59	+1.1
3,714,957	+	yiaD	b3552	0.59	+0.7
3,714,967	+	yiaD	b3552	0.60	-0.1
3,714,985	-	yiaD	b3552	0.63	+0.3
3,714,989	-	yiaD	b3552	0.63	+0.2
3,714,989	-	yiaD	b3552	0.63	+0.5
3,715,039	-	yiaD	b3552	0.71	-0.2
3,715,049	+	yiaD	b3552	0.73	+1.1
3,715,061	+	yiaD	b3552	0.74	-0.7
3,715,134	-	yiaD	b3552	0.85	+0.1
3,715,134	-	yiaD	b3552	0.85	-1.0
3,715,174	+				+0.4
3,715,224	+				-0.1
3,715,290	+				+0.0
3,715,290	+				+0.3
3,715,293	-				+0.0
3,715,339	-				-0.2
3,715,381	-				-0.6
3,715,395	+				-0.0