Experiment: 3-methyl-2-butenol 0.31 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsX and ftsE overlap by 8 nucleotides ftsE and ftsY are separated by 2 nucleotides
b3462: ftsX - predicted transporter subunit: membrane component of ABC superfamily (NCBI), at 3,599,051 to 3,600,109
ftsX
b3463: ftsE - predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI), at 3,600,102 to 3,600,770
ftsE
b3464: ftsY - fused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein (NCBI), at 3,600,773 to 3,602,266
ftsY
Position (kb)
3600
3601 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3599.283 kb on - strand, within ftsX at 3599.294 kb on - strand, within ftsX at 3599.655 kb on + strand, within ftsX at 3599.655 kb on + strand, within ftsX at 3599.720 kb on - strand, within ftsX at 3599.722 kb on - strand, within ftsX at 3599.795 kb on + strand, within ftsX at 3599.832 kb on + strand, within ftsX at 3599.840 kb on - strand, within ftsX at 3599.945 kb on - strand, within ftsX at 3599.945 kb on - strand, within ftsX at 3599.972 kb on - strand, within ftsX at 3600.020 kb on + strand at 3600.042 kb on + strand at 3600.042 kb on + strand at 3600.106 kb on - strand at 3600.117 kb on + strand at 3600.126 kb on - strand at 3600.126 kb on - strand at 3600.145 kb on - strand at 3600.147 kb on - strand at 3600.147 kb on - strand at 3600.157 kb on - strand at 3600.184 kb on - strand, within ftsE at 3600.286 kb on + strand, within ftsE at 3600.304 kb on + strand, within ftsE at 3600.309 kb on + strand, within ftsE at 3600.362 kb on + strand, within ftsE at 3600.412 kb on + strand, within ftsE at 3600.451 kb on + strand, within ftsE at 3600.485 kb on - strand, within ftsE at 3600.490 kb on - strand, within ftsE at 3600.604 kb on + strand, within ftsE at 3600.612 kb on - strand, within ftsE at 3600.692 kb on + strand, within ftsE at 3600.692 kb on + strand, within ftsE at 3600.719 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-2-butenol 0.31 vol% remove 3,599,283 - ftsX b3462 0.22 -2.8 3,599,294 - ftsX b3462 0.23 -1.9 3,599,655 + ftsX b3462 0.57 -1.2 3,599,655 + ftsX b3462 0.57 -2.9 3,599,720 - ftsX b3462 0.63 -1.6 3,599,722 - ftsX b3462 0.63 -0.0 3,599,795 + ftsX b3462 0.70 -2.2 3,599,832 + ftsX b3462 0.74 -0.2 3,599,840 - ftsX b3462 0.75 -2.3 3,599,945 - ftsX b3462 0.84 -0.7 3,599,945 - ftsX b3462 0.84 -2.4 3,599,972 - ftsX b3462 0.87 +0.3 3,600,020 + -0.9 3,600,042 + +0.7 3,600,042 + -0.3 3,600,106 - -0.7 3,600,117 + -3.6 3,600,126 - +0.4 3,600,126 - +0.9 3,600,145 - -0.1 3,600,147 - -1.8 3,600,147 - -2.3 3,600,157 - -0.6 3,600,184 - ftsE b3463 0.12 -2.9 3,600,286 + ftsE b3463 0.28 -1.8 3,600,304 + ftsE b3463 0.30 -2.2 3,600,309 + ftsE b3463 0.31 -2.7 3,600,362 + ftsE b3463 0.39 -0.8 3,600,412 + ftsE b3463 0.46 -1.3 3,600,451 + ftsE b3463 0.52 -2.5 3,600,485 - ftsE b3463 0.57 -0.0 3,600,490 - ftsE b3463 0.58 -1.6 3,600,604 + ftsE b3463 0.75 -1.9 3,600,612 - ftsE b3463 0.76 -0.9 3,600,692 + ftsE b3463 0.88 -0.4 3,600,692 + ftsE b3463 0.88 -0.8 3,600,719 - -2.3
Or see this region's nucleotide sequence