Experiment: 3-methyl-2-butenol 0.31 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mrp and metG are separated by 131 nucleotides metG and yehH are separated by 140 nucleotides
b2113: mrp - putative ATPase (VIMSS), at 2,191,081 to 2,192,190
mrp
b2114: metG - methionyl-tRNA synthetase (NCBI), at 2,192,322 to 2,194,355
metG
b4499: yehH - no description, at 2,194,496 to 2,198,291
yehH
Position (kb)
2192
2193
2194
2195 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2191.329 kb on + strand, within mrp at 2191.329 kb on + strand, within mrp at 2191.334 kb on + strand, within mrp at 2191.345 kb on + strand, within mrp at 2191.450 kb on + strand, within mrp at 2191.689 kb on - strand, within mrp at 2191.689 kb on - strand, within mrp at 2191.755 kb on - strand, within mrp at 2191.810 kb on + strand, within mrp at 2191.923 kb on - strand at 2191.961 kb on + strand, within mrp at 2191.989 kb on - strand, within mrp at 2192.094 kb on + strand at 2192.094 kb on + strand at 2192.201 kb on + strand at 2192.251 kb on - strand at 2193.943 kb on + strand, within metG at 2193.943 kb on + strand, within metG at 2194.315 kb on + strand at 2194.456 kb on - strand at 2194.456 kb on - strand at 2194.694 kb on - strand at 2194.694 kb on - strand at 2194.748 kb on + strand at 2194.827 kb on + strand at 2194.875 kb on + strand at 2194.875 kb on + strand at 2194.875 kb on + strand at 2194.885 kb on + strand, within yehH at 2194.890 kb on + strand, within yehH at 2194.955 kb on + strand, within yehH at 2194.955 kb on + strand, within yehH at 2194.960 kb on + strand, within yehH at 2194.960 kb on + strand, within yehH at 2194.960 kb on + strand, within yehH at 2194.963 kb on - strand, within yehH at 2194.963 kb on - strand, within yehH at 2194.968 kb on + strand, within yehH at 2194.968 kb on + strand, within yehH at 2195.047 kb on + strand, within yehH at 2195.047 kb on + strand, within yehH at 2195.059 kb on + strand, within yehH at 2195.073 kb on + strand, within yehH at 2195.078 kb on + strand, within yehH at 2195.083 kb on + strand, within yehH at 2195.095 kb on + strand, within yehH at 2195.099 kb on - strand, within yehH at 2195.100 kb on + strand, within yehH at 2195.102 kb on + strand, within yehH at 2195.102 kb on + strand, within yehH at 2195.136 kb on + strand, within yehH at 2195.136 kb on + strand, within yehH at 2195.151 kb on + strand, within yehH at 2195.156 kb on + strand, within yehH at 2195.156 kb on + strand, within yehH at 2195.161 kb on + strand, within yehH at 2195.164 kb on - strand, within yehH at 2195.165 kb on - strand, within yehH at 2195.184 kb on + strand, within yehH at 2195.201 kb on + strand, within yehH at 2195.239 kb on + strand, within yehH at 2195.239 kb on + strand, within yehH at 2195.287 kb on + strand, within yehH at 2195.295 kb on - strand, within yehH at 2195.334 kb on - strand, within yehH
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-2-butenol 0.31 vol% remove 2,191,329 + mrp b2113 0.22 +0.2 2,191,329 + mrp b2113 0.22 -0.4 2,191,334 + mrp b2113 0.23 -0.1 2,191,345 + mrp b2113 0.24 -0.5 2,191,450 + mrp b2113 0.33 -0.2 2,191,689 - mrp b2113 0.55 -0.4 2,191,689 - mrp b2113 0.55 +0.3 2,191,755 - mrp b2113 0.61 -0.4 2,191,810 + mrp b2113 0.66 +0.1 2,191,923 - -0.1 2,191,961 + mrp b2113 0.79 +0.2 2,191,989 - mrp b2113 0.82 +0.6 2,192,094 + -1.9 2,192,094 + -1.5 2,192,201 + -0.1 2,192,251 - -0.5 2,193,943 + metG b2114 0.80 -0.2 2,193,943 + metG b2114 0.80 -2.8 2,194,315 + +0.5 2,194,456 - +0.9 2,194,456 - -0.1 2,194,694 - -0.2 2,194,694 - +0.3 2,194,748 + +0.4 2,194,827 + +0.5 2,194,875 + +0.4 2,194,875 + -1.1 2,194,875 + -1.0 2,194,885 + yehH b4499 0.10 -0.5 2,194,890 + yehH b4499 0.10 +0.0 2,194,955 + yehH b4499 0.12 +1.6 2,194,955 + yehH b4499 0.12 +0.9 2,194,960 + yehH b4499 0.12 +0.5 2,194,960 + yehH b4499 0.12 -0.6 2,194,960 + yehH b4499 0.12 -0.1 2,194,963 - yehH b4499 0.12 -0.1 2,194,963 - yehH b4499 0.12 +0.9 2,194,968 + yehH b4499 0.12 -0.1 2,194,968 + yehH b4499 0.12 +0.2 2,195,047 + yehH b4499 0.15 +0.9 2,195,047 + yehH b4499 0.15 -0.3 2,195,059 + yehH b4499 0.15 +0.6 2,195,073 + yehH b4499 0.15 -0.5 2,195,078 + yehH b4499 0.15 -0.0 2,195,083 + yehH b4499 0.15 -0.4 2,195,095 + yehH b4499 0.16 +1.1 2,195,099 - yehH b4499 0.16 +0.3 2,195,100 + yehH b4499 0.16 -0.3 2,195,102 + yehH b4499 0.16 -0.1 2,195,102 + yehH b4499 0.16 +0.1 2,195,136 + yehH b4499 0.17 +0.2 2,195,136 + yehH b4499 0.17 +0.4 2,195,151 + yehH b4499 0.17 -0.5 2,195,156 + yehH b4499 0.17 +0.4 2,195,156 + yehH b4499 0.17 +0.9 2,195,161 + yehH b4499 0.18 +0.1 2,195,164 - yehH b4499 0.18 -0.2 2,195,165 - yehH b4499 0.18 +0.3 2,195,184 + yehH b4499 0.18 +0.3 2,195,201 + yehH b4499 0.19 +0.2 2,195,239 + yehH b4499 0.20 +0.9 2,195,239 + yehH b4499 0.20 +0.6 2,195,287 + yehH b4499 0.21 +1.0 2,195,295 - yehH b4499 0.21 +0.0 2,195,334 - yehH b4499 0.22 +0.2
Or see this region's nucleotide sequence