Experiment: 3-methyl-2-butenol 0.31 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt flgG and flgH are separated by 52 nucleotides flgH and flgI are separated by 11 nucleotides flgI and flgJ overlap by 1 nucleotides
b1078: flgG - flagellar component of cell-distal portion of basal-body rod (NCBI), at 1,133,952 to 1,134,734
flgG
b1079: flgH - flagellar L-ring protein precursor H (NCBI), at 1,134,787 to 1,135,485
flgH
b1080: flgI - homolog of Salmonella P-ring of flagella basal body (VIMSS), at 1,135,497 to 1,136,594
flgI
b1081: flgJ - flagellar biosynthesis protein FlgJ (NCBI), at 1,136,594 to 1,137,535
flgJ
Position (kb) 1135
1136
1137 Strain fitness (log2 ratio) -1
0
1
2 at 1134.598 kb on - strand, within flgG at 1134.598 kb on - strand, within flgG at 1134.700 kb on - strand at 1134.752 kb on + strand at 1134.854 kb on - strand at 1134.857 kb on + strand, within flgH at 1134.893 kb on + strand, within flgH at 1134.893 kb on + strand, within flgH at 1134.901 kb on - strand, within flgH at 1135.012 kb on - strand, within flgH at 1135.101 kb on + strand, within flgH at 1135.257 kb on - strand, within flgH at 1135.634 kb on - strand, within flgI at 1135.838 kb on + strand, within flgI at 1135.849 kb on + strand, within flgI at 1135.867 kb on - strand, within flgI at 1135.913 kb on - strand, within flgI at 1136.103 kb on + strand, within flgI at 1136.129 kb on - strand, within flgI at 1136.129 kb on - strand, within flgI at 1136.165 kb on - strand, within flgI at 1136.168 kb on + strand, within flgI at 1136.312 kb on - strand, within flgI at 1136.312 kb on - strand, within flgI at 1136.319 kb on + strand, within flgI at 1136.335 kb on - strand, within flgI at 1136.399 kb on + strand, within flgI at 1136.413 kb on - strand, within flgI at 1136.451 kb on + strand, within flgI at 1136.507 kb on + strand at 1136.507 kb on + strand at 1136.620 kb on - strand at 1136.622 kb on - strand at 1136.622 kb on - strand at 1136.776 kb on + strand, within flgJ at 1136.776 kb on + strand, within flgJ at 1136.810 kb on + strand, within flgJ at 1136.810 kb on + strand, within flgJ at 1136.821 kb on + strand, within flgJ at 1136.854 kb on - strand, within flgJ at 1136.867 kb on - strand, within flgJ at 1136.957 kb on - strand, within flgJ at 1137.015 kb on - strand, within flgJ at 1137.015 kb on - strand, within flgJ at 1137.122 kb on - strand, within flgJ at 1137.373 kb on - strand, within flgJ at 1137.452 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 3-methyl-2-butenol 0.31 vol% remove 1,134,598 - flgG b1078 0.83 -0.5 1,134,598 - flgG b1078 0.83 -0.4 1,134,700 - +0.3 1,134,752 + +0.9 1,134,854 - +0.3 1,134,857 + flgH b1079 0.10 -0.5 1,134,893 + flgH b1079 0.15 +0.1 1,134,893 + flgH b1079 0.15 +0.3 1,134,901 - flgH b1079 0.16 -1.5 1,135,012 - flgH b1079 0.32 +1.5 1,135,101 + flgH b1079 0.45 -0.9 1,135,257 - flgH b1079 0.67 +0.9 1,135,634 - flgI b1080 0.12 -0.6 1,135,838 + flgI b1080 0.31 +0.2 1,135,849 + flgI b1080 0.32 +0.9 1,135,867 - flgI b1080 0.34 +1.0 1,135,913 - flgI b1080 0.38 -0.5 1,136,103 + flgI b1080 0.55 -0.6 1,136,129 - flgI b1080 0.58 -0.7 1,136,129 - flgI b1080 0.58 -0.6 1,136,165 - flgI b1080 0.61 -1.1 1,136,168 + flgI b1080 0.61 -1.0 1,136,312 - flgI b1080 0.74 +0.2 1,136,312 - flgI b1080 0.74 +0.2 1,136,319 + flgI b1080 0.75 -1.0 1,136,335 - flgI b1080 0.76 -1.3 1,136,399 + flgI b1080 0.82 -0.3 1,136,413 - flgI b1080 0.83 -0.6 1,136,451 + flgI b1080 0.87 -0.5 1,136,507 + -0.5 1,136,507 + -0.3 1,136,620 - +0.4 1,136,622 - -0.4 1,136,622 - +0.4 1,136,776 + flgJ b1081 0.19 +0.2 1,136,776 + flgJ b1081 0.19 +0.6 1,136,810 + flgJ b1081 0.23 -0.5 1,136,810 + flgJ b1081 0.23 -0.3 1,136,821 + flgJ b1081 0.24 +0.4 1,136,854 - flgJ b1081 0.28 +0.1 1,136,867 - flgJ b1081 0.29 +0.2 1,136,957 - flgJ b1081 0.39 -0.1 1,137,015 - flgJ b1081 0.45 +2.4 1,137,015 - flgJ b1081 0.45 +0.1 1,137,122 - flgJ b1081 0.56 -0.7 1,137,373 - flgJ b1081 0.83 -0.0 1,137,452 + -0.7
Or see this region's nucleotide sequence