Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4415 and Psyr_4416 overlap by 4 nucleotides Psyr_4416 and Psyr_4417 overlap by 8 nucleotides Psyr_4417 and Psyr_4418 are separated by 135 nucleotides
Psyr_4415: Psyr_4415 - cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase, at 5,279,267 to 5,280,001
_4415
Psyr_4416: Psyr_4416 - precorrin-8X methylmutase, at 5,279,998 to 5,280,624
_4416
Psyr_4417: Psyr_4417 - Ferredoxin--nitrite reductase, at 5,280,617 to 5,281,960
_4417
Psyr_4418: Psyr_4418 - Precorrin-6Y C5,15-methyltransferase (decarboxylating), at 5,282,096 to 5,283,298
_4418
Position (kb) 5280
5281
5282 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.643 kb on + strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.644 kb on - strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.649 kb on + strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.650 kb on - strand, within Psyr_4415 at 5279.658 kb on + strand, within Psyr_4415 at 5279.658 kb on + strand, within Psyr_4415 at 5279.742 kb on + strand, within Psyr_4415 at 5279.742 kb on + strand, within Psyr_4415 at 5279.743 kb on - strand, within Psyr_4415 at 5279.892 kb on + strand, within Psyr_4415 at 5280.114 kb on + strand, within Psyr_4416 at 5280.114 kb on + strand, within Psyr_4416 at 5280.200 kb on + strand, within Psyr_4416 at 5280.200 kb on + strand, within Psyr_4416 at 5280.201 kb on - strand, within Psyr_4416 at 5280.201 kb on - strand, within Psyr_4416 at 5280.201 kb on - strand, within Psyr_4416 at 5280.590 kb on + strand at 5280.591 kb on - strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.592 kb on + strand at 5280.593 kb on - strand at 5280.593 kb on - strand at 5280.593 kb on - strand at 5280.614 kb on + strand at 5280.614 kb on + strand at 5280.673 kb on + strand at 5280.673 kb on + strand at 5280.674 kb on - strand at 5280.674 kb on - strand at 5280.674 kb on - strand at 5280.676 kb on + strand at 5280.730 kb on - strand at 5280.777 kb on - strand, within Psyr_4417 at 5280.833 kb on - strand, within Psyr_4417 at 5281.115 kb on + strand, within Psyr_4417 at 5281.116 kb on - strand, within Psyr_4417 at 5281.219 kb on - strand, within Psyr_4417 at 5281.373 kb on + strand, within Psyr_4417 at 5281.788 kb on + strand, within Psyr_4417 at 5282.002 kb on - strand at 5282.013 kb on - strand at 5282.013 kb on - strand at 5282.030 kb on - strand at 5282.032 kb on + strand at 5282.032 kb on + strand at 5282.032 kb on + strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.089 kb on + strand at 5282.090 kb on - strand at 5282.090 kb on - strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.093 kb on + strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.094 kb on - strand at 5282.138 kb on + strand at 5282.138 kb on + strand at 5282.373 kb on + strand, within Psyr_4418 at 5282.373 kb on + strand, within Psyr_4418 at 5282.373 kb on + strand, within Psyr_4418 at 5282.374 kb on - strand, within Psyr_4418 at 5282.408 kb on + strand, within Psyr_4418 at 5282.409 kb on - strand, within Psyr_4418 at 5282.409 kb on - strand, within Psyr_4418
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 5,279,643 + Psyr_4415 0.51 -1.5 5,279,643 + Psyr_4415 0.51 -0.9 5,279,643 + Psyr_4415 0.51 +0.5 5,279,643 + Psyr_4415 0.51 +0.4 5,279,643 + Psyr_4415 0.51 -0.2 5,279,644 - Psyr_4415 0.51 +0.3 5,279,644 - Psyr_4415 0.51 +1.5 5,279,644 - Psyr_4415 0.51 -0.3 5,279,644 - Psyr_4415 0.51 -0.3 5,279,644 - Psyr_4415 0.51 +0.9 5,279,649 + Psyr_4415 0.52 -0.9 5,279,649 + Psyr_4415 0.52 +0.7 5,279,649 + Psyr_4415 0.52 +0.0 5,279,649 + Psyr_4415 0.52 +0.5 5,279,650 - Psyr_4415 0.52 -0.2 5,279,650 - Psyr_4415 0.52 +2.0 5,279,650 - Psyr_4415 0.52 +0.5 5,279,650 - Psyr_4415 0.52 +0.3 5,279,658 + Psyr_4415 0.53 -1.4 5,279,658 + Psyr_4415 0.53 -0.3 5,279,742 + Psyr_4415 0.65 -2.2 5,279,742 + Psyr_4415 0.65 -0.7 5,279,743 - Psyr_4415 0.65 -0.3 5,279,892 + Psyr_4415 0.85 +0.3 5,280,114 + Psyr_4416 0.19 -0.7 5,280,114 + Psyr_4416 0.19 +1.4 5,280,200 + Psyr_4416 0.32 -0.6 5,280,200 + Psyr_4416 0.32 -0.2 5,280,201 - Psyr_4416 0.32 -1.1 5,280,201 - Psyr_4416 0.32 -0.5 5,280,201 - Psyr_4416 0.32 +0.4 5,280,590 + -0.7 5,280,591 - +0.7 5,280,592 + -1.2 5,280,592 + -0.3 5,280,592 + +0.6 5,280,592 + -0.5 5,280,592 + +0.6 5,280,592 + +0.1 5,280,593 - +0.5 5,280,593 - +0.5 5,280,593 - -0.9 5,280,614 + -1.5 5,280,614 + +1.5 5,280,673 + -0.9 5,280,673 + -0.2 5,280,674 - -0.4 5,280,674 - -1.6 5,280,674 - -0.9 5,280,676 + +0.1 5,280,730 - -1.5 5,280,777 - Psyr_4417 0.12 +1.3 5,280,833 - Psyr_4417 0.16 +0.3 5,281,115 + Psyr_4417 0.37 -0.1 5,281,116 - Psyr_4417 0.37 -0.5 5,281,219 - Psyr_4417 0.45 -0.6 5,281,373 + Psyr_4417 0.56 +2.7 5,281,788 + Psyr_4417 0.87 -1.0 5,282,002 - -1.0 5,282,013 - +0.1 5,282,013 - -0.9 5,282,030 - -0.1 5,282,032 + +0.1 5,282,032 + -0.3 5,282,032 + -0.3 5,282,089 + -0.8 5,282,089 + +0.1 5,282,089 + -1.9 5,282,090 - -0.2 5,282,090 - -0.0 5,282,093 + -0.2 5,282,093 + +1.9 5,282,093 + +1.0 5,282,093 + +0.1 5,282,093 + -0.6 5,282,093 + -0.5 5,282,093 + -0.4 5,282,093 + +1.2 5,282,093 + +0.8 5,282,093 + -0.1 5,282,093 + -0.4 5,282,093 + -0.7 5,282,094 - -1.5 5,282,094 - +1.4 5,282,094 - -0.4 5,282,094 - -0.8 5,282,094 - +0.2 5,282,094 - +0.1 5,282,094 - -1.8 5,282,094 - +0.9 5,282,094 - -2.3 5,282,094 - -1.6 5,282,138 + +0.6 5,282,138 + +0.2 5,282,373 + Psyr_4418 0.23 +1.1 5,282,373 + Psyr_4418 0.23 -2.5 5,282,373 + Psyr_4418 0.23 +0.4 5,282,374 - Psyr_4418 0.23 -0.0 5,282,408 + Psyr_4418 0.26 -0.7 5,282,409 - Psyr_4418 0.26 +0.4 5,282,409 - Psyr_4418 0.26 -1.5
Or see this region's nucleotide sequence