Strain Fitness in Escherichia coli BW25113 around b3011

Experiment: 3-methyl-2-butenol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-2-butenol 1.25 vol%
3,152,377	+				+0.1
3,152,608	-	yqhC	b3010	0.34	+0.7
3,152,608	-	yqhC	b3010	0.34	-0.8
3,152,615	+	yqhC	b3010	0.35	+1.4
3,152,615	+	yqhC	b3010	0.35	+0.4
3,152,628	-	yqhC	b3010	0.36	-0.0
3,152,630	-	yqhC	b3010	0.36	+0.6
3,152,635	-	yqhC	b3010	0.37	-0.2
3,152,728	-	yqhC	b3010	0.46	+0.2
3,152,738	-	yqhC	b3010	0.47	+1.1
3,152,837	-	yqhC	b3010	0.58	+0.5
3,152,922	-	yqhC	b3010	0.67	+0.1
3,153,056	-	yqhC	b3010	0.81	+1.6
3,153,245	-				+0.1
3,153,245	-				+0.5
3,153,246	-				-0.6
3,153,246	-				-0.3
3,153,342	+				+0.8
3,153,349	+				-0.5
3,153,357	-				+1.0
3,153,372	-				-0.7
3,153,374	+				-0.5
3,153,374	+				+0.7
3,153,384	+				-0.3
3,153,533	+	yqhD	b3011	0.13	+0.6
3,153,541	+	yqhD	b3011	0.14	+0.3
3,153,573	+	yqhD	b3011	0.17	+0.8
3,153,663	+	yqhD	b3011	0.25	+0.2
3,153,665	+	yqhD	b3011	0.25	+0.4
3,153,665	+	yqhD	b3011	0.25	+0.1
3,153,668	-	yqhD	b3011	0.25	-0.1
3,153,668	-	yqhD	b3011	0.25	-0.1
3,153,673	-	yqhD	b3011	0.25	-0.9
3,153,673	-	yqhD	b3011	0.25	+0.7
3,153,801	-	yqhD	b3011	0.36	+1.8
3,153,914	+	yqhD	b3011	0.46	-0.0
3,153,948	-	yqhD	b3011	0.49	-0.1
3,153,948	-	yqhD	b3011	0.49	+0.2
3,153,960	+	yqhD	b3011	0.50	+0.5
3,153,960	+	yqhD	b3011	0.50	+0.8
3,153,960	+	yqhD	b3011	0.50	+1.1
3,153,972	-	yqhD	b3011	0.51	-0.2
3,153,982	+	yqhD	b3011	0.52	+0.4
3,154,141	+	yqhD	b3011	0.66	+1.1
3,154,165	-	yqhD	b3011	0.68	+0.4
3,154,191	-	yqhD	b3011	0.70	+0.3
3,154,233	-	yqhD	b3011	0.74	+0.1
3,154,233	-	yqhD	b3011	0.74	-0.5
3,154,307	+	yqhD	b3011	0.80	+0.4
3,154,307	+	yqhD	b3011	0.80	-0.7
3,154,415	+	yqhD	b3011	0.89	+0.6
3,154,428	+				+0.7
3,154,429	+				+0.4
3,154,608	-				+0.6
3,154,655	-				+1.4
3,154,655	-				-0.0
3,154,694	+				+0.3
3,154,702	-				+1.0
3,154,821	-	yqhE	b3012	0.21	+0.1
3,154,821	-	yqhE	b3012	0.21	+0.4
3,154,906	+	yqhE	b3012	0.32	-0.4
3,154,909	+	yqhE	b3012	0.32	+0.0
3,154,919	+	yqhE	b3012	0.33	-0.9
3,154,963	-	yqhE	b3012	0.38	+0.1
3,154,976	-	yqhE	b3012	0.40	+0.3
3,154,976	-	yqhE	b3012	0.40	+0.1
3,155,101	+	yqhE	b3012	0.55	+0.3
3,155,121	-	yqhE	b3012	0.57	+0.7
3,155,121	-	yqhE	b3012	0.57	+0.8
3,155,160	-	yqhE	b3012	0.62	-0.1
3,155,163	+	yqhE	b3012	0.63	-0.5
3,155,163	+	yqhE	b3012	0.63	-0.5
3,155,163	+	yqhE	b3012	0.63	-0.9
3,155,271	-	yqhE	b3012	0.76	+0.9
3,155,318	+	yqhE	b3012	0.81	-0.1
3,155,318	+	yqhE	b3012	0.81	-0.9
3,155,382	-	yqhE	b3012	0.89	+0.3
3,155,382	-	yqhE	b3012	0.89	-0.6
3,155,382	-				-1.4
3,155,382	-	yqhE	b3012	0.89	-0.4
3,155,431	+				+0.2
3,155,449	+				+0.3
3,155,458	-				+1.1
3,155,493	+				-0.0