Strain Fitness in Escherichia coli BW25113 around b0073
Experiment: 3-methyl-2-butenol 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 3-methyl-2-butenol 1.25 vol% |
---|---|---|---|---|---|
remove | |||||
79,883 | + | leuC | b0072 | 0.30 | +0.1 |
79,888 | + | leuC | b0072 | 0.30 | -0.3 |
79,896 | - | leuC | b0072 | 0.31 | +0.3 |
79,931 | + | leuC | b0072 | 0.33 | -0.5 |
80,049 | - | leuC | b0072 | 0.42 | -1.3 |
80,049 | - | leuC | b0072 | 0.42 | -0.7 |
80,077 | + | leuC | b0072 | 0.44 | -0.7 |
80,077 | + | leuC | b0072 | 0.44 | -0.2 |
80,092 | - | leuC | b0072 | 0.45 | -1.4 |
80,120 | - | leuC | b0072 | 0.47 | -0.3 |
80,120 | - | leuC | b0072 | 0.47 | +0.1 |
80,141 | + | leuC | b0072 | 0.48 | +0.9 |
80,141 | + | leuC | b0072 | 0.48 | -0.6 |
80,165 | + | leuC | b0072 | 0.50 | -0.6 |
80,210 | + | leuC | b0072 | 0.53 | -1.5 |
80,210 | + | leuC | b0072 | 0.53 | -0.3 |
80,218 | - | leuC | b0072 | 0.54 | +0.5 |
80,218 | - | leuC | b0072 | 0.54 | -0.1 |
80,236 | - | leuC | b0072 | 0.55 | -0.4 |
80,349 | + | leuC | b0072 | 0.63 | +0.8 |
80,387 | + | +0.5 | |||
80,387 | + | leuC | b0072 | 0.66 | +0.7 |
80,414 | - | leuC | b0072 | 0.68 | +0.3 |
80,438 | - | leuC | b0072 | 0.70 | +0.3 |
80,671 | - | leuC | b0072 | 0.86 | -0.4 |
80,671 | - | leuC | b0072 | 0.86 | +0.2 |
80,671 | - | leuC | b0072 | 0.86 | -0.3 |
80,671 | - | leuC | b0072 | 0.86 | -0.9 |
80,714 | - | leuC | b0072 | 0.89 | +0.9 |
80,714 | - | leuC | b0072 | 0.89 | +0.9 |
80,785 | + | +0.6 | |||
80,785 | + | -0.2 | |||
80,893 | - | +1.3 | |||
80,893 | - | -0.4 | |||
80,918 | + | +0.9 | |||
80,918 | + | -0.0 | |||
80,929 | - | +0.1 | |||
80,965 | + | -1.9 | |||
80,973 | - | +0.1 | |||
80,986 | - | leuB | b0073 | 0.11 | -0.1 |
81,032 | - | leuB | b0073 | 0.15 | +0.1 |
81,037 | + | leuB | b0073 | 0.16 | +0.2 |
81,114 | + | leuB | b0073 | 0.23 | +1.6 |
81,114 | + | leuB | b0073 | 0.23 | -1.5 |
81,122 | - | leuB | b0073 | 0.23 | +0.1 |
81,191 | - | leuB | b0073 | 0.30 | -0.4 |
81,191 | - | leuB | b0073 | 0.30 | +0.2 |
81,224 | + | leuB | b0073 | 0.33 | -0.1 |
81,284 | + | leuB | b0073 | 0.38 | -1.1 |
81,284 | + | leuB | b0073 | 0.38 | -1.6 |
81,287 | + | leuB | b0073 | 0.38 | +0.2 |
81,290 | - | leuB | b0073 | 0.39 | +0.6 |
81,292 | - | leuB | b0073 | 0.39 | -0.5 |
81,292 | - | leuB | b0073 | 0.39 | -0.8 |
81,314 | - | leuB | b0073 | 0.41 | -1.1 |
81,404 | + | leuB | b0073 | 0.49 | -0.0 |
81,409 | - | leuB | b0073 | 0.50 | +0.9 |
81,457 | + | leuB | b0073 | 0.54 | -1.5 |
81,480 | + | leuB | b0073 | 0.56 | -0.2 |
81,554 | - | leuB | b0073 | 0.63 | +0.6 |
81,580 | + | leuB | b0073 | 0.65 | +0.0 |
81,607 | - | leuB | b0073 | 0.68 | +0.6 |
81,692 | + | leuB | b0073 | 0.76 | -0.6 |
81,692 | + | leuB | b0073 | 0.76 | -0.4 |
81,910 | + | +0.1 | |||
81,910 | + | -0.2 | |||
81,922 | - | +0.1 | |||
82,051 | + | -1.0 | |||
82,135 | + | leuA | b0074 | 0.11 | -0.2 |
82,243 | + | leuA | b0074 | 0.18 | -0.9 |
82,243 | + | leuA | b0074 | 0.18 | -0.7 |
82,246 | - | leuA | b0074 | 0.18 | -2.8 |
82,425 | + | leuA | b0074 | 0.30 | -0.2 |
82,462 | - | leuA | b0074 | 0.32 | +0.4 |
82,462 | - | leuA | b0074 | 0.32 | +1.2 |
82,502 | - | leuA | b0074 | 0.35 | +0.6 |
82,506 | - | leuA | b0074 | 0.35 | -0.2 |
82,624 | + | leuA | b0074 | 0.42 | -0.1 |
82,632 | - | leuA | b0074 | 0.43 | +0.2 |
82,635 | + | leuA | b0074 | 0.43 | +0.6 |
82,637 | + | leuA | b0074 | 0.43 | +0.2 |
82,638 | - | leuA | b0074 | 0.43 | -0.7 |
82,638 | - | leuA | b0074 | 0.43 | +0.7 |
82,647 | + | leuA | b0074 | 0.44 | -0.2 |
82,671 | - | leuA | b0074 | 0.45 | -1.3 |
82,671 | - | leuA | b0074 | 0.45 | -0.1 |
82,671 | - | leuA | b0074 | 0.45 | +1.4 |
82,713 | + | leuA | b0074 | 0.48 | -0.9 |
82,860 | + | leuA | b0074 | 0.57 | +0.5 |
82,860 | + | leuA | b0074 | 0.57 | -1.3 |
82,870 | + | leuA | b0074 | 0.58 | -0.0 |
82,878 | - | leuA | b0074 | 0.59 | -0.9 |
Or see this region's nucleotide sequence