Strain Fitness in Escherichia coli BW25113 around b3385

Experiment: 3-methyl-2-butenol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-2-butenol 1.25 vol%
3,511,699	-				-0.2
3,511,714	+				+1.3
3,511,714	+				+1.0
3,511,714	+				-1.5
3,511,793	+	gph	b3385	0.18	-0.4
3,511,795	+	gph	b3385	0.19	-0.5
3,511,820	+	gph	b3385	0.22	-0.1
3,511,825	-	gph	b3385	0.23	-0.4
3,511,851	+	gph	b3385	0.26	+0.1
3,511,851	+	gph	b3385	0.26	+0.6
3,511,856	-	gph	b3385	0.27	-0.9
3,511,877	+	gph	b3385	0.30	+0.4
3,511,877	+	gph	b3385	0.30	-1.1
3,511,887	+	gph	b3385	0.31	-0.6
3,511,897	-	gph	b3385	0.32	-0.3
3,511,925	-	gph	b3385	0.36	+0.4
3,511,950	-	gph	b3385	0.39	-0.4
3,511,950	-	gph	b3385	0.39	+0.6
3,511,965	+	gph	b3385	0.41	-0.1
3,511,965	+	gph	b3385	0.41	-0.8
3,511,965	+	gph	b3385	0.41	+0.8
3,511,973	-	gph	b3385	0.42	+0.3
3,511,975	-	gph	b3385	0.42	+0.5
3,511,975	-	gph	b3385	0.42	+0.4
3,511,985	-	gph	b3385	0.44	+1.0
3,512,007	+	gph	b3385	0.47	-1.2
3,512,011	-	gph	b3385	0.47	-0.4
3,512,020	-	gph	b3385	0.48	+0.2
3,512,021	-	gph	b3385	0.48	-0.2
3,512,026	-	gph	b3385	0.49	+0.1
3,512,030	+	gph	b3385	0.50	-0.5
3,512,038	-	gph	b3385	0.51	+0.3
3,512,038	-	gph	b3385	0.51	+0.0
3,512,038	-	gph	b3385	0.51	-0.7
3,512,104	+	gph	b3385	0.59	+0.2
3,512,109	+	gph	b3385	0.60	-0.9
3,512,132	+	gph	b3385	0.63	+0.2
3,512,140	-	gph	b3385	0.64	+0.6
3,512,140	-	gph	b3385	0.64	-0.4
3,512,140	-	gph	b3385	0.64	-0.3
3,512,166	+	gph	b3385	0.68	-0.2
3,512,166	+	gph	b3385	0.68	+0.3
3,512,172	-	gph	b3385	0.68	-0.3
3,512,177	+	gph	b3385	0.69	+1.8
3,512,216	-	gph	b3385	0.74	+0.8
3,512,217	+	gph	b3385	0.74	-0.7
3,512,218	+	gph	b3385	0.74	+0.4
3,512,226	-	gph	b3385	0.75	-0.4
3,512,226	-	gph	b3385	0.75	-0.9
3,512,235	+	gph	b3385	0.77	+0.7
3,512,246	+	gph	b3385	0.78	-0.4
3,512,295	+	gph	b3385	0.85	+0.7
3,512,295	+	gph	b3385	0.85	-1.0
3,512,313	-	gph	b3385	0.87	+0.8
3,512,313	-	gph	b3385	0.87	+0.6
3,512,345	+				-0.2
3,512,345	+				-0.9
3,512,352	+				-0.1
3,512,358	-				-0.1
3,512,360	-				-0.5
3,512,360	-				-1.5
3,512,368	-				+0.1
3,512,425	-				-0.3
3,512,717	+	rpe	b3386	0.46	-1.5
3,513,065	+				+0.8
3,513,065	+				-1.2
3,513,065	+				-0.0
3,513,065	+				+0.8
3,513,073	-				-0.5
3,513,122	+				+0.6
3,513,130	-				-0.4
3,513,130	-				-2.4
3,513,136	+				-2.5
3,513,146	-				-2.7
3,513,166	-				-0.8
3,513,179	+				+0.2
3,513,179	+				-0.3
3,513,180	+				-0.6
3,513,180	+				-2.3
3,513,180	+				-0.9
3,513,187	-	dam	b3387	0.11	+0.3
3,513,187	-	dam	b3387	0.11	-0.8
3,513,187	-	dam	b3387	0.11	+1.8
3,513,187	-	dam	b3387	0.11	+0.3
3,513,187	-	dam	b3387	0.11	-0.1
3,513,187	-	dam	b3387	0.11	+0.6
3,513,187	-	dam	b3387	0.11	-0.3
3,513,187	-	dam	b3387	0.11	-2.1
3,513,189	+	dam	b3387	0.11	-0.2
3,513,189	-	dam	b3387	0.11	+0.3
3,513,189	-	dam	b3387	0.11	+0.3
3,513,199	-	dam	b3387	0.12	-1.4
3,513,220	+	dam	b3387	0.14	-1.1
3,513,220	+	dam	b3387	0.14	-0.7
3,513,222	+	dam	b3387	0.15	-1.4
3,513,222	+	dam	b3387	0.15	+0.3
3,513,230	-	dam	b3387	0.16	-1.9
3,513,232	-	dam	b3387	0.16	+0.0
3,513,235	+	dam	b3387	0.16	-0.3
3,513,279	-	dam	b3387	0.22	+0.4
3,513,284	+	dam	b3387	0.22	-1.1
3,513,286	+	dam	b3387	0.22	-1.0
3,513,293	-	dam	b3387	0.23	-1.3
3,513,352	+	dam	b3387	0.30	-1.1
3,513,375	-	dam	b3387	0.33	-3.0
3,513,377	+	dam	b3387	0.33	+0.0
3,513,380	+	dam	b3387	0.34	+1.3
3,513,380	+	dam	b3387	0.34	-1.7
3,513,382	+	dam	b3387	0.34	-0.4
3,513,396	+	dam	b3387	0.35	+0.2
3,513,402	+	dam	b3387	0.36	-0.1
3,513,404	-	dam	b3387	0.36	-2.4
3,513,404	-	dam	b3387	0.36	-0.5