Strain Fitness in Escherichia coli BW25113 around b0109

Experiment: 3-methyl-2-butenol 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3-methyl-2-butenol 1.25 vol%
116,760	-	hofB	b0107	0.75	+0.2
116,777	+	hofB	b0107	0.77	+0.5
116,777	+	hofB	b0107	0.77	-2.0
116,872	+	hofB	b0107	0.84	-0.0
116,882	+	hofB	b0107	0.84	-0.7
116,957	-	hofB	b0107	0.90	+1.1
116,964	-				+0.6
117,046	+				+0.2
117,056	+				+0.1
117,069	+				+0.0
117,075	+				+1.8
117,075	+				+0.2
117,075	+				+0.5
117,081	-				+0.2
117,081	-				+0.1
117,084	+				+0.2
117,087	+				-0.3
117,227	-	ppdD	b0108	0.27	+0.5
117,281	+	ppdD	b0108	0.39	+0.4
117,281	+	ppdD	b0108	0.39	-2.3
117,293	-	ppdD	b0108	0.42	+0.2
117,302	+	ppdD	b0108	0.44	+0.2
117,302	+	ppdD	b0108	0.44	+0.8
117,385	+	ppdD	b0108	0.63	-1.5
117,387	+	ppdD	b0108	0.63	-1.2
117,508	-				-0.3
117,508	-				-0.9
117,511	-				+0.4
117,511	-				-0.2
117,525	-				-0.3
117,525	-				-1.3
117,603	+				+0.1
117,603	+				-0.3
117,839	+				+0.5
117,856	-	nadC	b0109	0.12	-1.9
117,856	-	nadC	b0109	0.12	+3.2
117,879	-	nadC	b0109	0.14	-0.8
117,879	-	nadC	b0109	0.14	-0.5
117,881	-	nadC	b0109	0.14	+0.7
117,922	-	nadC	b0109	0.19	-0.1
117,922	-	nadC	b0109	0.19	+0.6
118,107	-	nadC	b0109	0.40	+0.5
118,201	+	nadC	b0109	0.50	+0.7
118,230	+	nadC	b0109	0.53	+0.9
118,230	+	nadC	b0109	0.53	+0.4
118,296	+	nadC	b0109	0.61	+0.7
118,355	-	nadC	b0109	0.67	+0.9
118,355	-	nadC	b0109	0.67	-0.5
118,364	+	nadC	b0109	0.68	-0.1
118,382	-	nadC	b0109	0.70	+0.3
118,538	+	nadC	b0109	0.88	+0.6
118,623	+				+0.8
118,631	-				+0.1
118,737	+				-0.9
118,737	+				+0.1
118,781	+				-2.3
118,836	+	ampD	b0110	0.19	+0.8
118,868	+	ampD	b0110	0.24	+1.8
118,868	+	ampD	b0110	0.24	+0.5
118,904	-	ampD	b0110	0.31	+0.2
119,033	-	ampD	b0110	0.54	+0.4
119,101	+	ampD	b0110	0.67	+2.0
119,109	-	ampD	b0110	0.68	+0.7
119,109	-	ampD	b0110	0.68	+0.0
119,117	-	ampD	b0110	0.70	+0.0
119,119	+	ampD	b0110	0.70	+2.1
119,150	-	ampD	b0110	0.76	+0.0
119,150	-	ampD	b0110	0.76	-1.2
119,163	+	ampD	b0110	0.78	+0.1
119,168	-	ampD	b0110	0.79	+0.1
119,191	+	ampD	b0110	0.83	+1.2
119,191	+	ampD	b0110	0.83	+2.0
119,274	+				-2.0
119,339	+				+0.7
119,339	+				-0.5
119,499	-	ampE	b0111	0.25	-0.3
119,499	-	ampE	b0111	0.25	-1.3
119,522	+	ampE	b0111	0.28	-2.7
119,528	-	ampE	b0111	0.29	-0.4
119,555	-	ampE	b0111	0.32	-1.1
119,555	-	ampE	b0111	0.32	+0.7
119,558	-	ampE	b0111	0.32	+0.5
119,567	+	ampE	b0111	0.33	+0.8
119,567	+	ampE	b0111	0.33	-0.4