Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3061

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
3,660,278	-		Psyr_3060	0.68	+1.8
3,660,324	-		Psyr_3060	0.71	-1.9
3,660,386	+		Psyr_3060	0.76	-0.3
3,660,386	+		Psyr_3060	0.76	+1.3
3,660,386	+		Psyr_3060	0.76	-0.3
3,660,386	+		Psyr_3060	0.76	-0.6
3,660,386	+		Psyr_3060	0.76	+0.2
3,660,386	+		Psyr_3060	0.76	-0.6
3,660,387	-		Psyr_3060	0.76	-1.4
3,660,387	-		Psyr_3060	0.76	-0.1
3,660,387	-		Psyr_3060	0.76	+0.0
3,660,387	-		Psyr_3060	0.76	-0.3
3,660,387	-		Psyr_3060	0.76	-1.0
3,660,387	-		Psyr_3060	0.76	+0.3
3,660,643	-				+0.4
3,660,674	+				+0.3
3,660,691	+				+0.8
3,660,691	+				+0.9
3,660,692	-				-1.3
3,660,703	-				-1.1
3,660,853	+				+0.1
3,660,853	+				+0.7
3,661,149	-		Psyr_3061	0.52	-0.8
3,661,166	+		Psyr_3061	0.54	+0.3
3,661,167	-		Psyr_3061	0.54	+0.2
3,661,167	-		Psyr_3061	0.54	+1.1
3,661,167	-		Psyr_3061	0.54	+0.7
3,661,383	+		Psyr_3061	0.88	-2.0
3,661,383	+		Psyr_3061	0.88	+0.7
3,661,457	+				+0.7
3,661,457	+				-0.0
3,661,457	+				-1.8
3,661,458	-				+0.7
3,661,458	-				+0.0
3,661,458	-				-0.0
3,661,461	+				+0.4
3,661,462	-				-0.7
3,661,622	+		Psyr_3062	0.13	-0.5
3,661,622	+		Psyr_3062	0.13	+0.8
3,661,737	+		Psyr_3062	0.26	-0.8
3,661,740	+		Psyr_3062	0.26	-0.2
3,661,740	+		Psyr_3062	0.26	+0.6
3,661,740	+		Psyr_3062	0.26	-0.2
3,661,741	-		Psyr_3062	0.26	-0.8
3,661,741	-		Psyr_3062	0.26	-1.2
3,661,878	+		Psyr_3062	0.42	-1.6
3,661,895	+		Psyr_3062	0.44	+0.2
3,661,896	-		Psyr_3062	0.44	+0.6
3,662,054	+		Psyr_3062	0.61	+0.3
3,662,058	+		Psyr_3062	0.62	-0.4
3,662,058	+		Psyr_3062	0.62	-0.7
3,662,058	+		Psyr_3062	0.62	-1.6
3,662,059	-		Psyr_3062	0.62	-0.3
3,662,292	+		Psyr_3062	0.88	-0.1
3,662,293	-		Psyr_3062	0.88	-1.3
3,662,293	-		Psyr_3062	0.88	+0.2
3,662,411	+				-0.6
3,662,432	-				+0.3
3,662,434	-				+1.0
3,662,434	-				-0.3
3,662,434	-				+1.1
3,662,434	-				-1.0
3,662,434	-				-1.1
3,662,446	+				+0.7
3,662,446	+				-0.1
3,662,446	+				-0.2
3,662,446	+				-0.4
3,662,446	+				-0.5
3,662,446	+				+1.0
3,662,446	+				-0.0
3,662,447	-				+0.2
3,662,447	-				+0.1
3,662,447	-				-0.4
3,662,447	-				-0.7
3,662,447	-				-0.6
3,662,447	-				-0.3
3,662,447	-				+0.8
3,662,447	-				+0.2