Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_1911

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,184,767	+				+0.6
2,184,786	+				-0.5
2,184,786	+				-0.9
2,184,788	+				+1.3
2,184,789	-				+0.7
2,184,789	-				-0.3
2,184,789	-				-0.9
2,184,789	-				-1.1
2,184,800	+				+0.7
2,184,830	-				-1.5
2,184,837	+				-0.7
2,184,860	-				-2.7
2,185,049	+		Psyr_1910	0.27	-1.9
2,185,050	-		Psyr_1910	0.27	-1.0
2,185,050	-		Psyr_1910	0.27	-1.3
2,185,050	-		Psyr_1910	0.27	-0.5
2,185,050	-		Psyr_1910	0.27	+0.3
2,185,050	-		Psyr_1910	0.27	+1.9
2,185,084	+		Psyr_1910	0.32	-2.6
2,185,332	+		Psyr_1910	0.67	-0.7
2,185,332	+		Psyr_1910	0.67	-1.5
2,185,332	+		Psyr_1910	0.67	-1.0
2,185,332	+		Psyr_1910	0.67	-2.8
2,185,332	+		Psyr_1910	0.67	-1.0
2,185,332	+		Psyr_1910	0.67	-3.0
2,185,332	+		Psyr_1910	0.67	-2.2
2,185,332	+		Psyr_1910	0.67	-0.3
2,185,333	-		Psyr_1910	0.67	+0.3
2,185,333	-		Psyr_1910	0.67	+0.0
2,185,333	-		Psyr_1910	0.67	-1.8
2,185,364	+		Psyr_1910	0.72	+0.3
2,185,364	+		Psyr_1910	0.72	-1.0
2,185,364	+		Psyr_1910	0.72	-0.9
2,185,364	+		Psyr_1910	0.72	-0.3
2,185,365	-		Psyr_1910	0.72	-0.7
2,185,365	-		Psyr_1910	0.72	-1.4
2,185,365	-		Psyr_1910	0.72	-1.3
2,185,365	-		Psyr_1910	0.72	-1.7
2,185,382	+		Psyr_1910	0.74	-0.7
2,185,484	+		Psyr_1910	0.89	-0.5
2,185,505	+				-0.4
2,185,505	+				-0.8
2,185,566	+				+2.5
2,185,589	+				+0.3
2,185,615	+				-0.9
2,185,909	+		Psyr_1911	0.86	-1.2
2,185,909	+		Psyr_1911	0.86	-0.9
2,185,909	+		Psyr_1911	0.86	-1.3
2,185,909	+		Psyr_1911	0.86	-0.2
2,185,910	-		Psyr_1911	0.87	-1.2
2,185,951	+				-3.3
2,185,951	+				-0.1
2,185,952	-				+0.6
2,185,952	-				-1.3
2,186,012	+				+0.7
2,186,032	+				+1.7
2,186,066	+				-0.1
2,186,109	+				+1.4
2,186,141	+				-1.7
2,186,141	+				+0.0