Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3897

Experiment: LB_plus_SM_buffer

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF3896 and GFF3897 are separated by 4 nucleotidesGFF3897 and GFF3898 are separated by 319 nucleotides GFF3896 - O-antigen flippase Wzx, at 174,948 to 176,228 GFF3896 GFF3897 - Putative glycosyltransferase, at 176,233 to 177,234 GFF3897 GFF3898 - O-antigen flippase Wzx, at 177,554 to 178,615 GFF3898 Position (kb) 176 177 178Strain fitness (log2 ratio) -1 0 1at 177.665 kb on - strand, within GFF3898

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer
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177,665 - GFF3898 0.10 -1.0

Or see this region's nucleotide sequence