Strain Fitness in Escherichia coli BL21 around ECD_03991

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
4,249,471	-		ECD_03990	0.35	-0.3
4,249,471	-		ECD_03990	0.35	-0.4
4,249,487	+		ECD_03990	0.37	-1.3
4,249,599	-		ECD_03990	0.45	-0.4
4,249,644	+		ECD_03990	0.48	-0.1
4,249,645	-		ECD_03990	0.48	-1.2
4,249,719	-		ECD_03990	0.54	-0.6
4,249,733	+		ECD_03990	0.55	-0.6
4,249,733	+		ECD_03990	0.55	+0.3
4,249,803	+		ECD_03990	0.60	-1.1
4,249,803	+		ECD_03990	0.60	-0.3
4,249,818	-		ECD_03990	0.61	+0.5
4,249,821	-		ECD_03990	0.61	-1.1
4,249,853	+		ECD_03990	0.64	+0.5
4,249,853	+		ECD_03990	0.64	+0.1
4,249,854	-		ECD_03990	0.64	-0.0
4,249,854	-		ECD_03990	0.64	-0.8
4,249,858	+		ECD_03990	0.64	-0.4
4,249,911	-		ECD_03990	0.68	-1.3
4,249,928	+		ECD_03990	0.69	-0.1
4,249,929	-		ECD_03990	0.69	-0.5
4,249,949	+		ECD_03990	0.71	+0.6
4,249,968	+		ECD_03990	0.72	+0.4
4,250,080	+		ECD_03990	0.80	+0.6
4,250,099	+		ECD_03990	0.82	+0.3
4,250,100	-		ECD_03990	0.82	-0.8
4,250,100	-		ECD_03990	0.82	-0.5
4,250,132	-		ECD_03990	0.84	-0.6
4,250,173	+		ECD_03990	0.87	-0.3
4,250,278	+				-0.1
4,250,278	+				-0.1
4,250,278	+				-0.2
4,250,279	-				-0.2
4,250,279	-				-0.4
4,250,279	-				-0.9
4,250,279	-				-0.2
4,250,279	-				+0.3
4,250,280	+				-0.3
4,250,280	+				+0.2
4,250,280	+				+0.2
4,250,280	+				+0.2
4,250,281	-				-0.0
4,250,378	+				-0.2
4,250,379	-				-0.3
4,250,429	-				-0.5
4,250,478	+				+0.1
4,250,523	+				-1.4
4,250,523	+				-0.7
4,250,523	+				-0.6
4,250,523	+				-0.7
4,250,524	-				-2.3
4,250,524	-				-1.5
4,250,525	+				-0.4
4,250,525	+				-0.1
4,250,525	+				-0.8
4,250,525	+				+0.1
4,250,525	+				-0.3
4,250,525	+				-0.4
4,250,526	-				-1.6
4,250,526	-				-0.7
4,250,526	-				-1.5
4,250,526	-				-1.4
4,250,526	-				-3.0
4,250,529	+				-1.2
4,250,529	+				-0.5
4,250,530	-				-1.9
4,250,530	-				-2.5
4,250,530	-				-0.5
4,250,530	-				-1.5
4,250,538	+				-0.1
4,250,538	+				-0.9
4,250,539	-				+0.3
4,250,539	-				-1.6
4,250,539	-				-0.4
4,250,539	-				-0.3
4,250,541	+				-0.7
4,250,582	+				-0.8
4,250,615	+		ECD_03991	0.11	-0.7
4,250,669	+		ECD_03991	0.15	-0.7
4,250,697	-		ECD_03991	0.17	-1.0
4,250,719	+		ECD_03991	0.18	-0.7
4,250,720	-		ECD_03991	0.18	-0.9
4,250,732	+		ECD_03991	0.19	-0.9
4,250,754	-		ECD_03991	0.21	-0.9
4,250,757	-		ECD_03991	0.21	-1.5
4,250,784	+		ECD_03991	0.23	-1.4
4,250,784	+		ECD_03991	0.23	-1.2
4,250,784	+		ECD_03991	0.23	-0.5
4,250,784	+		ECD_03991	0.23	-1.3
4,250,785	-		ECD_03991	0.23	-2.6
4,250,785	-		ECD_03991	0.23	-0.6
4,250,785	-		ECD_03991	0.23	-1.5
4,250,805	+		ECD_03991	0.24	-0.4
4,250,805	+		ECD_03991	0.24	+0.1
4,250,805	+		ECD_03991	0.24	-0.2
4,250,806	-		ECD_03991	0.25	-0.7
4,250,806	-		ECD_03991	0.25	+1.1
4,250,949	-		ECD_03991	0.35	-1.2
4,250,952	+		ECD_03991	0.35	+0.0
4,250,953	-		ECD_03991	0.35	-1.0
4,250,953	-		ECD_03991	0.35	-1.3
4,250,953	-		ECD_03991	0.35	-0.9
4,250,953	-		ECD_03991	0.35	+0.2
4,250,953	-		ECD_03991	0.35	-0.7
4,250,953	-		ECD_03991	0.35	-1.7
4,251,017	+		ECD_03991	0.40	-0.5
4,251,018	-		ECD_03991	0.40	-0.7
4,251,107	+		ECD_03991	0.46	-1.2
4,251,175	-		ECD_03991	0.51	-1.2
4,251,175	-		ECD_03991	0.51	+1.9
4,251,176	+		ECD_03991	0.51	-1.9
4,251,177	-		ECD_03991	0.51	-0.2
4,251,195	-		ECD_03991	0.52	-0.5
4,251,209	+		ECD_03991	0.53	-0.2
4,251,210	-		ECD_03991	0.53	-0.8
4,251,210	-		ECD_03991	0.53	-0.6
4,251,213	+		ECD_03991	0.53	-0.7
4,251,214	-		ECD_03991	0.53	-0.1
4,251,217	-		ECD_03991	0.54	-0.9
4,251,225	+		ECD_03991	0.54	-1.1
4,251,225	+		ECD_03991	0.54	+0.3
4,251,225	+		ECD_03991	0.54	-0.2
4,251,226	-		ECD_03991	0.54	-0.5
4,251,226	-		ECD_03991	0.54	-0.2
4,251,227	-		ECD_03991	0.54	-0.5
4,251,255	+		ECD_03991	0.56	-0.5
4,251,259	-		ECD_03991	0.57	-0.9
4,251,259	-		ECD_03991	0.57	-0.2
4,251,259	-		ECD_03991	0.57	-1.1
4,251,296	-		ECD_03991	0.59	+0.5
4,251,299	-		ECD_03991	0.60	+0.6
4,251,370	+		ECD_03991	0.65	+1.0
4,251,400	+		ECD_03991	0.67	-0.9
4,251,400	+		ECD_03991	0.67	-0.2
4,251,408	+		ECD_03991	0.67	+0.4
4,251,408	+		ECD_03991	0.67	+0.0
4,251,409	-		ECD_03991	0.67	+0.3
4,251,409	-		ECD_03991	0.67	-0.1
4,251,409	-		ECD_03991	0.67	+0.1
4,251,409	-		ECD_03991	0.67	-0.3
4,251,478	+		ECD_03991	0.72	+0.4
4,251,479	-		ECD_03991	0.72	-0.8
4,251,479	-		ECD_03991	0.72	-1.2
4,251,500	+		ECD_03991	0.74	-0.2
4,251,521	+		ECD_03991	0.75	+0.0
4,251,521	+		ECD_03991	0.75	-0.4
4,251,532	+		ECD_03991	0.76	-0.7
4,251,533	-		ECD_03991	0.76	-0.6
4,251,533	-		ECD_03991	0.76	-0.5
4,251,533	-		ECD_03991	0.76	-1.3
4,251,552	+		ECD_03991	0.77	+0.6
4,251,566	+		ECD_03991	0.78	+0.1
4,251,567	-		ECD_03991	0.79	-0.8
4,251,633	+		ECD_03991	0.83	-1.7
4,251,633	+		ECD_03991	0.83	-0.7
4,251,634	-		ECD_03991	0.83	-1.1
4,251,638	-		ECD_03991	0.84	-1.0
4,251,638	-		ECD_03991	0.84	-0.6
4,251,657	-		ECD_03991	0.85	-1.4
4,251,668	-		ECD_03991	0.86	-0.3
4,251,668	-		ECD_03991	0.86	-1.1
4,251,670	+		ECD_03991	0.86	+0.1
4,251,671	-		ECD_03991	0.86	-1.1
4,251,671	-		ECD_03991	0.86	-1.0
4,251,674	+		ECD_03991	0.86	-0.4
4,251,674	+		ECD_03991	0.86	-0.2
4,251,675	-		ECD_03991	0.86	-1.3
4,251,686	+		ECD_03991	0.87	-2.3
4,251,686	+		ECD_03991	0.87	-0.7
4,251,794	+				-0.0
4,251,880	-				-1.2
4,251,880	-				-0.5
4,251,880	-				-0.0
4,251,932	-				-0.1
4,251,932	-				-0.7
4,252,065	+				-0.4
4,252,104	-		ECD_03992	0.15	-0.1
4,252,192	-		ECD_03992	0.29	+0.0
4,252,198	+		ECD_03992	0.30	-0.6
4,252,250	+		ECD_03992	0.38	+0.3
4,252,250	+		ECD_03992	0.38	+0.5
4,252,250	+		ECD_03992	0.38	-0.4
4,252,264	+		ECD_03992	0.41	+0.1
4,252,265	-		ECD_03992	0.41	+0.4
4,252,399	+		ECD_03992	0.62	+0.5
4,252,405	+		ECD_03992	0.63	-0.7
4,252,406	-		ECD_03992	0.63	+0.3
4,252,406	-		ECD_03992	0.63	-0.1
4,252,452	-		ECD_03992	0.70	-0.3
4,252,453	+		ECD_03992	0.71	+0.1
4,252,453	+		ECD_03992	0.71	-0.1
4,252,454	-		ECD_03992	0.71	-0.9
4,252,454	-		ECD_03992	0.71	-0.8
4,252,511	+		ECD_03992	0.80	-0.8
4,252,512	-		ECD_03992	0.80	+1.1
4,252,512	-		ECD_03992	0.80	-0.5
4,252,571	-		ECD_03992	0.89	-1.0
4,252,670	-				-0.8
4,252,670	-				+0.0
4,252,670	-				-0.7
4,252,761	+				-0.4
4,252,761	+				-0.1
4,252,762	-				-0.1
4,252,762	-				+0.1
4,252,765	+				-0.1
4,252,765	+				-0.3
4,252,765	+				+0.7
4,252,766	-				-0.2
4,252,813	+				-0.7
4,252,853	+				-1.1
4,252,854	-				-0.3