Strain Fitness in Escherichia coli BL21 around ECD_03696

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03694 and ECD_03695 are separated by 152 nucleotidesECD_03695 and ECD_03696 are separated by 40 nucleotidesECD_03696 and ECD_03697 are separated by 13 nucleotidesECD_03697 and ECD_03698 are separated by 268 nucleotides ECD_03694: ECD_03694 - hypothetical protein, at 3,894,076 to 3,894,924 _03694 ECD_03695: ECD_03695 - Magnesium and cobalt transport protein corA, at 3,895,077 to 3,895,253 _03695 ECD_03696: ECD_03696 - DUF2628 family putative inner membrane protein, at 3,895,294 to 3,895,674 _03696 ECD_03697: ECD_03697 - PRK11371 family inner membrane protein, at 3,895,688 to 3,895,894 _03697 ECD_03698: ECD_03698 - putative chloramphenical resistance permease, at 3,896,163 to 3,897,053 _03698 Position (kb) 3895 3896Strain fitness (log2 ratio) -3 -2 -1 0 1at 3894.852 kb on - strandat 3894.944 kb on - strandat 3895.129 kb on - strand, within ECD_03695at 3895.447 kb on - strand, within ECD_03696at 3895.820 kb on - strand, within ECD_03697at 3895.822 kb on - strand, within ECD_03697at 3895.932 kb on - strandat 3896.086 kb on - strandat 3896.177 kb on + strandat 3896.186 kb on + strandat 3896.249 kb on + strandat 3896.272 kb on + strand, within ECD_03698at 3896.328 kb on + strand, within ECD_03698at 3896.329 kb on - strand, within ECD_03698at 3896.477 kb on - strand, within ECD_03698at 3896.477 kb on - strand, within ECD_03698at 3896.514 kb on + strand, within ECD_03698at 3896.515 kb on - strand, within ECD_03698at 3896.563 kb on + strand, within ECD_03698at 3896.564 kb on - strand, within ECD_03698at 3896.564 kb on - strand, within ECD_03698at 3896.564 kb on - strand, within ECD_03698at 3896.600 kb on + strand, within ECD_03698at 3896.601 kb on - strand, within ECD_03698at 3896.601 kb on - strand, within ECD_03698at 3896.604 kb on + strand, within ECD_03698at 3896.605 kb on - strand, within ECD_03698at 3896.605 kb on - strand, within ECD_03698at 3896.605 kb on - strand, within ECD_03698at 3896.605 kb on - strand, within ECD_03698at 3896.605 kb on - strand, within ECD_03698

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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3,894,852 - -2.1
3,894,944 - -0.7
3,895,129 - ECD_03695 0.29 -1.7
3,895,447 - ECD_03696 0.40 +0.9
3,895,820 - ECD_03697 0.64 +0.1
3,895,822 - ECD_03697 0.65 -1.3
3,895,932 - -1.4
3,896,086 - -0.2
3,896,177 + -0.5
3,896,186 + -0.9
3,896,249 + -0.3
3,896,272 + ECD_03698 0.12 -0.4
3,896,328 + ECD_03698 0.19 -2.8
3,896,329 - ECD_03698 0.19 -0.6
3,896,477 - ECD_03698 0.35 -0.4
3,896,477 - ECD_03698 0.35 -0.5
3,896,514 + ECD_03698 0.39 -1.0
3,896,515 - ECD_03698 0.40 +0.2
3,896,563 + ECD_03698 0.45 -0.4
3,896,564 - ECD_03698 0.45 -0.6
3,896,564 - ECD_03698 0.45 -0.6
3,896,564 - ECD_03698 0.45 -0.4
3,896,600 + ECD_03698 0.49 -0.5
3,896,601 - ECD_03698 0.49 -0.5
3,896,601 - ECD_03698 0.49 -0.0
3,896,604 + ECD_03698 0.49 -1.1
3,896,605 - ECD_03698 0.50 -0.7
3,896,605 - ECD_03698 0.50 -0.3
3,896,605 - ECD_03698 0.50 -1.0
3,896,605 - ECD_03698 0.50 +0.2
3,896,605 - ECD_03698 0.50 -0.0

Or see this region's nucleotide sequence