Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03694 and ECD_03695 are separated by 152 nucleotides ECD_03695 and ECD_03696 are separated by 40 nucleotides ECD_03696 and ECD_03697 are separated by 13 nucleotides ECD_03697 and ECD_03698 are separated by 268 nucleotides
ECD_03694: ECD_03694 - hypothetical protein, at 3,894,076 to 3,894,924
_03694
ECD_03695: ECD_03695 - Magnesium and cobalt transport protein corA, at 3,895,077 to 3,895,253
_03695
ECD_03696: ECD_03696 - DUF2628 family putative inner membrane protein, at 3,895,294 to 3,895,674
_03696
ECD_03697: ECD_03697 - PRK11371 family inner membrane protein, at 3,895,688 to 3,895,894
_03697
ECD_03698: ECD_03698 - putative chloramphenical resistance permease, at 3,896,163 to 3,897,053
_03698
Position (kb)
3895
3896 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3894.852 kb on - strand at 3894.944 kb on - strand at 3895.129 kb on - strand, within ECD_03695 at 3895.447 kb on - strand, within ECD_03696 at 3895.820 kb on - strand, within ECD_03697 at 3895.822 kb on - strand, within ECD_03697 at 3895.932 kb on - strand at 3896.086 kb on - strand at 3896.177 kb on + strand at 3896.186 kb on + strand at 3896.249 kb on + strand at 3896.272 kb on + strand, within ECD_03698 at 3896.328 kb on + strand, within ECD_03698 at 3896.329 kb on - strand, within ECD_03698 at 3896.477 kb on - strand, within ECD_03698 at 3896.477 kb on - strand, within ECD_03698 at 3896.514 kb on + strand, within ECD_03698 at 3896.515 kb on - strand, within ECD_03698 at 3896.563 kb on + strand, within ECD_03698 at 3896.564 kb on - strand, within ECD_03698 at 3896.564 kb on - strand, within ECD_03698 at 3896.564 kb on - strand, within ECD_03698 at 3896.600 kb on + strand, within ECD_03698 at 3896.601 kb on - strand, within ECD_03698 at 3896.601 kb on - strand, within ECD_03698 at 3896.604 kb on + strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10 remove 3,894,852 - -2.1 3,894,944 - -0.7 3,895,129 - ECD_03695 0.29 -1.7 3,895,447 - ECD_03696 0.40 +0.9 3,895,820 - ECD_03697 0.64 +0.1 3,895,822 - ECD_03697 0.65 -1.3 3,895,932 - -1.4 3,896,086 - -0.2 3,896,177 + -0.5 3,896,186 + -0.9 3,896,249 + -0.3 3,896,272 + ECD_03698 0.12 -0.4 3,896,328 + ECD_03698 0.19 -2.8 3,896,329 - ECD_03698 0.19 -0.6 3,896,477 - ECD_03698 0.35 -0.4 3,896,477 - ECD_03698 0.35 -0.5 3,896,514 + ECD_03698 0.39 -1.0 3,896,515 - ECD_03698 0.40 +0.2 3,896,563 + ECD_03698 0.45 -0.4 3,896,564 - ECD_03698 0.45 -0.6 3,896,564 - ECD_03698 0.45 -0.6 3,896,564 - ECD_03698 0.45 -0.4 3,896,600 + ECD_03698 0.49 -0.5 3,896,601 - ECD_03698 0.49 -0.5 3,896,601 - ECD_03698 0.49 -0.0 3,896,604 + ECD_03698 0.49 -1.1 3,896,605 - ECD_03698 0.50 -0.7 3,896,605 - ECD_03698 0.50 -0.3 3,896,605 - ECD_03698 0.50 -1.0 3,896,605 - ECD_03698 0.50 +0.2 3,896,605 - ECD_03698 0.50 -0.0
Or see this region's nucleotide sequence