Strain Fitness in Escherichia coli BL21 around ECD_02871

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
3,009,460	-		ECD_02870	0.43	-0.2
3,009,490	-		ECD_02870	0.45	+0.8
3,009,580	-		ECD_02870	0.50	-1.1
3,009,580	-		ECD_02870	0.50	+0.2
3,009,632	-		ECD_02870	0.54	+0.1
3,009,632	-		ECD_02870	0.54	-0.2
3,009,650	-		ECD_02870	0.55	+0.5
3,009,650	-		ECD_02870	0.55	-0.5
3,009,650	-		ECD_02870	0.55	-0.5
3,009,650	-		ECD_02870	0.55	+0.6
3,009,650	-		ECD_02870	0.55	+0.8
3,009,651	+		ECD_02870	0.55	-0.2
3,009,651	+		ECD_02870	0.55	-0.5
3,009,651	+		ECD_02870	0.55	+0.1
3,009,652	-		ECD_02870	0.55	-0.5
3,009,699	+		ECD_02870	0.57	-0.8
3,009,699	+		ECD_02870	0.57	-0.6
3,009,699	+		ECD_02870	0.57	-2.2
3,009,699	+		ECD_02870	0.57	-1.3
3,009,699	+		ECD_02870	0.57	-0.4
3,009,699	+		ECD_02870	0.57	-0.2
3,009,699	+		ECD_02870	0.57	-0.9
3,009,700	-		ECD_02870	0.58	-0.9
3,009,700	-		ECD_02870	0.58	+0.2
3,009,764	+		ECD_02870	0.61	-1.2
3,009,852	+		ECD_02870	0.66	+0.1
3,009,852	+		ECD_02870	0.66	-0.5
3,009,853	-		ECD_02870	0.66	-0.2
3,009,853	-		ECD_02870	0.66	+1.1
3,010,112	-		ECD_02870	0.82	-1.8
3,010,112	-		ECD_02870	0.82	-0.9
3,010,112	-		ECD_02870	0.82	-0.7
3,010,155	+		ECD_02870	0.84	-1.3
3,010,155	+		ECD_02870	0.84	-1.2
3,010,156	-		ECD_02870	0.84	-0.7
3,010,156	-		ECD_02870	0.84	+0.9
3,010,229	-		ECD_02870	0.89	-1.0
3,010,231	+		ECD_02870	0.89	-0.8
3,010,231	+		ECD_02870	0.89	-0.1
3,010,231	+		ECD_02870	0.89	-0.7
3,010,231	+		ECD_02870	0.89	-0.7
3,010,232	-		ECD_02870	0.89	-1.6
3,010,232	-		ECD_02870	0.89	+0.0
3,010,235	+		ECD_02870	0.89	-0.9
3,010,235	+		ECD_02870	0.89	-2.0
3,010,235	+		ECD_02870	0.89	-1.1
3,010,236	-		ECD_02870	0.89	-0.3
3,010,236	-		ECD_02870	0.89	-0.1
3,010,236	-		ECD_02870	0.89	-1.3
3,010,246	+		ECD_02870	0.90	-1.2
3,010,246	+		ECD_02870	0.90	-2.9
3,010,246	+		ECD_02870	0.90	-0.7
3,010,246	+		ECD_02870	0.90	-0.3
3,010,247	-		ECD_02870	0.90	-0.3
3,010,247	-		ECD_02870	0.90	-0.5
3,010,374	-				-0.7
3,010,374	-				-0.3
3,010,374	-				+0.4
3,010,405	+				-0.2
3,010,406	-				+0.8
3,010,408	+				-1.4
3,010,408	+				+0.0
3,010,409	-				-0.7
3,010,447	-				-0.2
3,010,463	-				-0.1
3,010,495	+				-2.8
3,010,496	-				-1.8
3,010,503	-				-0.7
3,010,533	+				-0.4
3,010,604	+		ECD_02871	0.16	-1.2
3,010,604	+		ECD_02871	0.16	-1.2
3,010,605	-		ECD_02871	0.16	+0.1
3,010,630	+		ECD_02871	0.18	+0.1
3,010,748	+		ECD_02871	0.28	-2.9
3,010,748	+		ECD_02871	0.28	+0.1
3,010,748	+		ECD_02871	0.28	-1.1
3,010,749	-		ECD_02871	0.28	-0.9
3,010,787	+		ECD_02871	0.31	-0.7
3,010,791	+		ECD_02871	0.31	+0.2
3,010,792	-		ECD_02871	0.32	-1.0
3,010,792	-		ECD_02871	0.32	-0.7
3,010,792	-		ECD_02871	0.32	-0.1
3,010,792	-		ECD_02871	0.32	+0.8
3,010,855	-		ECD_02871	0.37	+0.1
3,010,855	-		ECD_02871	0.37	+0.4
3,011,102	-		ECD_02871	0.58	+0.4
3,011,176	-		ECD_02871	0.64	+0.2
3,011,177	+		ECD_02871	0.64	-0.6
3,011,177	+		ECD_02871	0.64	-1.1
3,011,177	+		ECD_02871	0.64	-1.0
3,011,177	+		ECD_02871	0.64	-0.8
3,011,177	+		ECD_02871	0.64	-1.4
3,011,177	+		ECD_02871	0.64	-0.2
3,011,177	+		ECD_02871	0.64	+0.1
3,011,178	-		ECD_02871	0.64	-0.8
3,011,178	-		ECD_02871	0.64	-0.1
3,011,178	-		ECD_02871	0.64	+0.2
3,011,178	-		ECD_02871	0.64	+0.2
3,011,178	-		ECD_02871	0.64	+0.4
3,011,178	-		ECD_02871	0.64	-0.7
3,011,178	-		ECD_02871	0.64	-0.4
3,011,178	-		ECD_02871	0.64	-0.5
3,011,178	-		ECD_02871	0.64	-0.4
3,011,178	-		ECD_02871	0.64	+0.9
3,011,178	-		ECD_02871	0.64	+0.0
3,011,178	-		ECD_02871	0.64	-0.0
3,011,187	+		ECD_02871	0.65	-0.1
3,011,240	+		ECD_02871	0.70	-0.5
3,011,240	+		ECD_02871	0.70	-0.4
3,011,241	-		ECD_02871	0.70	+0.5
3,011,241	-		ECD_02871	0.70	+0.1
3,011,241	-		ECD_02871	0.70	+1.2
3,011,246	+		ECD_02871	0.70	-1.4
3,011,247	-		ECD_02871	0.70	-0.1
3,011,247	-		ECD_02871	0.70	+0.6
3,011,303	+		ECD_02871	0.75	-1.7
3,011,369	+		ECD_02871	0.80	-2.2
3,011,369	+		ECD_02871	0.80	-0.8
3,011,370	-		ECD_02871	0.81	+1.0
3,011,372	-		ECD_02871	0.81	+0.7
3,011,517	+				-1.3
3,011,518	-				+0.0
3,011,518	-				-0.4
3,011,518	-				+0.7
3,011,518	-				-1.0
3,011,654	+				-1.0
3,011,692	+		ECD_02872	0.11	-0.2
3,011,693	-		ECD_02872	0.11	+0.1
3,011,694	+		ECD_02872	0.11	-1.1
3,011,694	+		ECD_02872	0.11	-0.3
3,011,694	+		ECD_02872	0.11	-1.5
3,011,694	+		ECD_02872	0.11	+0.3
3,011,695	-		ECD_02872	0.11	+0.0
3,011,695	-		ECD_02872	0.11	+0.8
3,011,710	+		ECD_02872	0.12	-0.3
3,011,839	-		ECD_02872	0.25	-0.5
3,011,839	-		ECD_02872	0.25	-0.7
3,011,851	+		ECD_02872	0.27	+2.1
3,011,851	+		ECD_02872	0.27	+0.3
3,011,852	-		ECD_02872	0.27	+1.9
3,011,859	+		ECD_02872	0.27	+0.0
3,011,859	+		ECD_02872	0.27	+0.0
3,011,860	-		ECD_02872	0.28	-0.8
3,011,860	-		ECD_02872	0.28	-0.4
3,011,860	-		ECD_02872	0.28	+0.3
3,011,860	-		ECD_02872	0.28	-0.1
3,011,860	-		ECD_02872	0.28	-0.2
3,011,994	-		ECD_02872	0.41	-0.9
3,012,058	+		ECD_02872	0.48	-0.8
3,012,058	+		ECD_02872	0.48	-0.3
3,012,058	+		ECD_02872	0.48	-1.3
3,012,058	+		ECD_02872	0.48	-0.9
3,012,059	-		ECD_02872	0.48	+1.2
3,012,059	-		ECD_02872	0.48	+0.1
3,012,059	-		ECD_02872	0.48	+0.1
3,012,059	-		ECD_02872	0.48	+0.5
3,012,059	-		ECD_02872	0.48	+1.0
3,012,084	+		ECD_02872	0.50	-3.3
3,012,085	-		ECD_02872	0.50	-0.6
3,012,105	+		ECD_02872	0.52	+0.2
3,012,105	+		ECD_02872	0.52	+0.1
3,012,238	+		ECD_02872	0.66	-1.2
3,012,238	+		ECD_02872	0.66	-2.0
3,012,238	+		ECD_02872	0.66	-1.3
3,012,239	-		ECD_02872	0.66	-0.1
3,012,239	-		ECD_02872	0.66	-0.4
3,012,239	-		ECD_02872	0.66	+0.5
3,012,239	-		ECD_02872	0.66	-0.4
3,012,239	-		ECD_02872	0.66	+0.9
3,012,239	-		ECD_02872	0.66	-0.3
3,012,250	+		ECD_02872	0.67	-1.2
3,012,255	+		ECD_02872	0.68	-1.0
3,012,256	-		ECD_02872	0.68	+0.0
3,012,256	-		ECD_02872	0.68	-1.7
3,012,256	-		ECD_02872	0.68	+0.0
3,012,256	-		ECD_02872	0.68	+0.1
3,012,329	-		ECD_02872	0.75	+0.1
3,012,329	-		ECD_02872	0.75	-0.3
3,012,330	+		ECD_02872	0.75	-0.2
3,012,331	-		ECD_02872	0.75	+0.5
3,012,331	-		ECD_02872	0.75	-1.3
3,012,380	-		ECD_02872	0.80	-1.2
3,012,398	-		ECD_02872	0.82	+0.9
3,012,432	-		ECD_02872	0.86	+0.4
3,012,451	-		ECD_02872	0.87	-0.3
3,012,557	-				-0.1
3,012,563	-				+0.0