Strain Fitness in Escherichia coli BL21 around ECD_02167

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02166 and ECD_02167 are separated by 272 nucleotidesECD_02167 and ECD_02168 overlap by 11 nucleotides ECD_02166: ECD_02166 - sn-glycerol-3-phosphate transporter, at 2,241,385 to 2,242,743 _02166 ECD_02167: ECD_02167 - anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit, at 2,243,016 to 2,244,644 _02167 ECD_02168: ECD_02168 - anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit, at 2,244,634 to 2,245,893 _02168 Position (kb) 2243 2244 2245Strain fitness (log2 ratio) -2 -1 0 1at 2242.170 kb on + strand, within ECD_02166at 2242.171 kb on - strand, within ECD_02166at 2242.171 kb on - strand, within ECD_02166at 2242.171 kb on - strand, within ECD_02166at 2242.172 kb on + strand, within ECD_02166at 2242.172 kb on + strand, within ECD_02166at 2242.311 kb on + strand, within ECD_02166at 2242.311 kb on + strand, within ECD_02166at 2242.312 kb on - strand, within ECD_02166at 2242.591 kb on - strand, within ECD_02166at 2243.051 kb on + strandat 2243.051 kb on + strandat 2243.376 kb on - strand, within ECD_02167at 2243.781 kb on - strand, within ECD_02167at 2243.827 kb on + strand, within ECD_02167at 2243.831 kb on + strand, within ECD_02167at 2244.313 kb on + strand, within ECD_02167at 2244.314 kb on - strand, within ECD_02167at 2244.314 kb on - strand, within ECD_02167at 2244.597 kb on + strandat 2244.654 kb on + strandat 2245.050 kb on - strand, within ECD_02168at 2245.244 kb on + strand, within ECD_02168at 2245.244 kb on + strand, within ECD_02168at 2245.257 kb on + strand, within ECD_02168at 2245.257 kb on + strand, within ECD_02168at 2245.350 kb on - strand, within ECD_02168

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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2,242,170 + ECD_02166 0.58 -1.2
2,242,171 - ECD_02166 0.58 +0.4
2,242,171 - ECD_02166 0.58 +0.0
2,242,171 - ECD_02166 0.58 +1.5
2,242,172 + ECD_02166 0.58 -2.1
2,242,172 + ECD_02166 0.58 +0.7
2,242,311 + ECD_02166 0.68 -0.1
2,242,311 + ECD_02166 0.68 -1.3
2,242,312 - ECD_02166 0.68 +1.4
2,242,591 - ECD_02166 0.89 +0.6
2,243,051 + -0.2
2,243,051 + -0.6
2,243,376 - ECD_02167 0.22 -0.8
2,243,781 - ECD_02167 0.47 -1.0
2,243,827 + ECD_02167 0.50 +0.0
2,243,831 + ECD_02167 0.50 -0.2
2,244,313 + ECD_02167 0.80 -0.1
2,244,314 - ECD_02167 0.80 -0.8
2,244,314 - ECD_02167 0.80 -1.0
2,244,597 + -0.4
2,244,654 + -0.3
2,245,050 - ECD_02168 0.33 -0.2
2,245,244 + ECD_02168 0.48 +0.2
2,245,244 + ECD_02168 0.48 -0.7
2,245,257 + ECD_02168 0.49 -0.6
2,245,257 + ECD_02168 0.49 -1.3
2,245,350 - ECD_02168 0.57 -2.3

Or see this region's nucleotide sequence