Strain Fitness in Escherichia coli BL21 around ECD_01708

Experiment: Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01706 and ECD_01707 are separated by 84 nucleotidesECD_01707 and ECD_01708 are separated by 298 nucleotidesECD_01708 and ECD_01709 are separated by 201 nucleotides ECD_01706: ECD_01706 - N,N'-diacetylchitobiose-specific enzyme IIC component of PTS, at 1,764,269 to 1,765,627 _01706 ECD_01707: ECD_01707 - N,N'-diacetylchitobiose-specific enzyme IIB component of PTS, at 1,765,712 to 1,766,032 _01707 ECD_01708: ECD_01708 - osmotically-inducible lipoprotein, at 1,766,331 to 1,766,669 _01708 ECD_01709: ECD_01709 - NAD synthetase, NH3/glutamine-dependent, at 1,766,871 to 1,767,698 _01709 Position (kb) 1766 1767Strain fitness (log2 ratio) -1 0 1at 1765.572 kb on - strandat 1766.332 kb on + strandat 1766.575 kb on - strand, within ECD_01708

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
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1,765,572 - -0.7
1,766,332 + -1.1
1,766,575 - ECD_01708 0.72 +0.3

Or see this region's nucleotide sequence