Strain Fitness in Escherichia coli BW25113 around b3353

Experiment: limonene 2.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	limonene 2.5 vol%
3,480,241	-	yheS	b3352	0.49	+0.9
3,480,254	-	yheS	b3352	0.49	+0.9
3,480,274	-	yheS	b3352	0.50	+0.1
3,480,279	-	yheS	b3352	0.51	+0.4
3,480,284	+	yheS	b3352	0.51	-0.2
3,480,284	+	yheS	b3352	0.51	+0.5
3,480,379	-	yheS	b3352	0.56	+0.5
3,480,449	-	yheS	b3352	0.59	-0.6
3,480,517	-	yheS	b3352	0.63	+0.4
3,480,633	+	yheS	b3352	0.69	-0.9
3,480,633	+	yheS	b3352	0.69	-0.2
3,480,724	+	yheS	b3352	0.74	+0.3
3,480,724	+	yheS	b3352	0.74	+0.7
3,480,768	-	yheS	b3352	0.76	+1.3
3,480,783	+	yheS	b3352	0.77	-0.2
3,480,783	+	yheS	b3352	0.77	+0.1
3,480,805	-	yheS	b3352	0.78	+1.9
3,480,809	-	yheS	b3352	0.78	+0.5
3,480,816	-	yheS	b3352	0.79	+0.3
3,480,850	-	yheS	b3352	0.80	-0.0
3,480,861	-	yheS	b3352	0.81	+0.3
3,480,869	-	yheS	b3352	0.81	-1.7
3,480,883	-	yheS	b3352	0.82	+0.5
3,480,894	+	yheS	b3352	0.83	-0.0
3,480,924	-	yheS	b3352	0.84	+1.1
3,480,926	+	yheS	b3352	0.84	-0.3
3,480,934	-	yheS	b3352	0.85	+0.4
3,480,951	+	yheS	b3352	0.86	+0.7
3,480,978	+	yheS	b3352	0.87	-0.2
3,480,988	-	yheS	b3352	0.88	+0.5
3,480,990	+	yheS	b3352	0.88	-0.2
3,481,026	-	yheS	b3352	0.90	+0.7
3,481,029	+	yheS	b3352	0.90	+0.1
3,481,029	+	yheS	b3352	0.90	+0.5
3,481,051	+				+0.4
3,481,078	+				+0.8
3,481,086	-				+0.7
3,481,086	-				+0.3
3,481,097	-				+0.7
3,481,102	+				-0.4
3,481,102	+				+0.6
3,481,102	+				+0.5
3,481,102	+				+0.2
3,481,208	-				+0.7
3,481,267	+				+0.1
3,481,274	+				-0.0
3,481,282	-				-0.3
3,481,316	-				+0.2
3,481,356	+	yheT	b3353	0.13	+0.1
3,481,356	-	yheT	b3353	0.13	+1.2
3,481,366	-	yheT	b3353	0.14	+0.9
3,481,376	-	yheT	b3353	0.15	+0.3
3,481,411	-	yheT	b3353	0.18	+1.0
3,481,433	+	yheT	b3353	0.20	+0.4
3,481,433	+	yheT	b3353	0.20	+0.4
3,481,456	-	yheT	b3353	0.23	+0.8
3,481,464	+	yheT	b3353	0.23	-0.3
3,481,464	+	yheT	b3353	0.23	+0.5
3,481,473	+	yheT	b3353	0.24	+0.7
3,481,502	+	yheT	b3353	0.27	+1.0
3,481,574	+	yheT	b3353	0.34	+0.3
3,481,574	-	yheT	b3353	0.34	+0.0
3,481,574	-	yheT	b3353	0.34	+0.4
3,481,578	+	yheT	b3353	0.35	+0.4
3,481,613	+	yheT	b3353	0.38	+1.1
3,481,613	+	yheT	b3353	0.38	+1.5
3,481,690	+	yheT	b3353	0.46	+1.8
3,481,690	+	yheT	b3353	0.46	+0.5
3,481,695	-	yheT	b3353	0.46	+0.2
3,481,764	-	yheT	b3353	0.53	+0.6
3,481,827	+	yheT	b3353	0.59	+0.2
3,481,865	+	yheT	b3353	0.63	+0.8
3,481,865	+	yheT	b3353	0.63	-0.6
3,481,970	+	yheT	b3353	0.73	+1.7
3,481,990	+	yheT	b3353	0.75	+0.5
3,481,990	+	yheT	b3353	0.75	-0.2
3,481,997	+	yheT	b3353	0.76	+1.0
3,481,997	+	yheT	b3353	0.76	+0.2
3,481,997	+	yheT	b3353	0.76	+0.1
3,481,997	+	yheT	b3353	0.76	+0.4
3,481,997	+	yheT	b3353	0.76	+1.0
3,482,005	-	yheT	b3353	0.76	+1.0
3,482,005	-	yheT	b3353	0.76	+0.4
3,482,005	-	yheT	b3353	0.76	+1.0
3,482,005	-	yheT	b3353	0.76	+0.9
3,482,017	-	yheT	b3353	0.78	-0.3
3,482,017	-	yheT	b3353	0.78	+0.0
3,482,021	-	yheT	b3353	0.78	+0.5
3,482,021	-	yheT	b3353	0.78	+0.6
3,482,041	+	yheT	b3353	0.80	+0.9
3,482,051	+	yheT	b3353	0.81	-0.6
3,482,051	+	yheT	b3353	0.81	+1.7
3,482,051	+	yheT	b3353	0.81	+0.7
3,482,109	-	yheT	b3353	0.87	+0.5
3,482,109	-	yheT	b3353	0.87	+0.1
3,482,127	-	yheT	b3353	0.88	+0.6
3,482,151	-				+0.3
3,482,181	+				+0.7
3,482,196	-				+0.9
3,482,196	-				-0.4
3,482,210	-				-0.7
3,482,210	-				-0.1
3,482,211	-				-0.7
3,482,253	-				-0.0
3,482,263	-	yheU	b3354	0.11	+0.4
3,482,380	+	yheU	b3354	0.64	-0.1
3,482,380	-	yheU	b3354	0.64	-0.3
3,482,388	-	yheU	b3354	0.68	+0.1
3,482,388	-	yheU	b3354	0.68	+0.1
3,482,398	+	yheU	b3354	0.72	-0.9
3,482,401	-	yheU	b3354	0.74	-0.7
3,482,408	+	yheU	b3354	0.77	-0.4
3,482,411	-	yheU	b3354	0.78	+0.9
3,482,411	-	yheU	b3354	0.78	+0.2
3,482,411	-	yheU	b3354	0.78	-0.0
3,482,416	-	yheU	b3354	0.80	-0.1
3,482,422	+	yheU	b3354	0.83	+0.9
3,482,466	-				-0.1
3,482,611	-	prkB	b3355	0.11	+0.1
3,482,626	-	prkB	b3355	0.13	-0.1
3,482,629	-	prkB	b3355	0.13	+1.6
3,482,646	+	prkB	b3355	0.15	+0.3
3,482,654	-	prkB	b3355	0.16	+0.5
3,482,654	-	prkB	b3355	0.16	-0.1
3,482,654	-	prkB	b3355	0.16	+1.4
3,482,770	+	prkB	b3355	0.30	+0.0
3,482,775	+	prkB	b3355	0.30	-0.5
3,482,783	-	prkB	b3355	0.31	+1.5
3,482,783	-	prkB	b3355	0.31	-1.2
3,482,853	-	prkB	b3355	0.39	+0.2
3,482,853	-	prkB	b3355	0.39	-0.7
3,482,890	-	prkB	b3355	0.43	-0.6
3,482,890	-	prkB	b3355	0.43	-2.6
3,482,897	+	prkB	b3355	0.44	-0.4
3,482,902	+	prkB	b3355	0.45	-0.7
3,482,902	+	prkB	b3355	0.45	-0.7
3,482,922	-	prkB	b3355	0.47	+0.5
3,482,922	-	prkB	b3355	0.47	-0.2
3,482,923	+	prkB	b3355	0.47	+0.3
3,482,931	+	prkB	b3355	0.48	+1.1
3,482,931	+	prkB	b3355	0.48	+0.3
3,482,939	-	prkB	b3355	0.49	+0.4
3,482,939	-	prkB	b3355	0.49	-0.1
3,482,947	+	prkB	b3355	0.50	+0.7
3,482,947	+	prkB	b3355	0.50	+0.8
3,482,974	-	prkB	b3355	0.53	+0.8
3,482,977	+	prkB	b3355	0.53	-1.0
3,482,979	-	prkB	b3355	0.54	-0.3
3,482,979	-	prkB	b3355	0.54	+0.5
3,482,992	-	prkB	b3355	0.55	-0.1
3,482,992	-	prkB	b3355	0.55	+0.1
3,483,033	+	prkB	b3355	0.60	-0.1
3,483,046	+	prkB	b3355	0.61	-1.1
3,483,053	+	prkB	b3355	0.62	+0.5
3,483,061	-	prkB	b3355	0.63	+0.0
3,483,061	-	prkB	b3355	0.63	-0.2
3,483,066	-	prkB	b3355	0.64	+0.2
3,483,068	+	prkB	b3355	0.64	+0.4
3,483,095	-	prkB	b3355	0.67	+0.4
3,483,142	-	prkB	b3355	0.72	-0.4
3,483,203	-	prkB	b3355	0.79	+0.5
3,483,218	+	prkB	b3355	0.81	+0.5
3,483,226	-	prkB	b3355	0.82	-0.4
3,483,237	+	prkB	b3355	0.83	-0.1
3,483,237	+	prkB	b3355	0.83	+0.1
3,483,242	+	prkB	b3355	0.84	-0.2
3,483,242	+	prkB	b3355	0.84	+0.1