Strain Fitness in Escherichia coli BW25113 around b2260

Experiment: limonene 2.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	limonene 2.5 vol%
2,370,715	+	yfbW	b4544	0.40	+0.2
2,370,722	-	yfbW	b4544	0.43	+0.3
2,370,723	-	yfbW	b4544	0.43	+0.1
2,370,723	-	yfbW	b4544	0.43	+1.1
2,370,747	+	yfbW	b4544	0.50	-0.3
2,370,747	+	yfbW	b4544	0.50	-0.3
2,370,909	+				+0.6
2,370,909	-				+0.4
2,370,911	+				+0.5
2,371,053	+	b2258	b2258	0.36	+0.1
2,371,397	-	pmrD	b2259	0.39	+0.2
2,371,562	-				+1.0
2,371,624	-				-2.3
2,371,624	-				+0.9
2,371,647	-				+0.4
2,371,755	-				-0.6
2,371,760	-				-1.1
2,371,831	-	menE	b2260	0.12	+0.1
2,371,831	-	menE	b2260	0.12	-0.1
2,371,939	+	menE	b2260	0.20	-0.9
2,371,939	+	menE	b2260	0.20	-0.8
2,371,970	+	menE	b2260	0.22	-0.1
2,371,995	+	menE	b2260	0.24	+0.9
2,372,001	+	menE	b2260	0.24	-1.2
2,372,001	+	menE	b2260	0.24	-0.2
2,372,019	-	menE	b2260	0.26	+0.3
2,372,019	-	menE	b2260	0.26	+0.5
2,372,168	-	menE	b2260	0.37	-1.7
2,372,209	+	menE	b2260	0.40	-1.7
2,372,209	+	menE	b2260	0.40	-0.7
2,372,223	-	menE	b2260	0.41	-0.5
2,372,345	-	menE	b2260	0.50	-1.3
2,372,355	-	menE	b2260	0.51	-0.5
2,372,366	-	menE	b2260	0.51	-0.8
2,372,401	+	menE	b2260	0.54	+0.5
2,372,504	-	menE	b2260	0.62	-0.4
2,372,564	-	menE	b2260	0.66	-0.2
2,372,565	-	menE	b2260	0.66	-0.7
2,372,569	-	menE	b2260	0.66	-0.1
2,372,635	+	menE	b2260	0.71	+0.3
2,372,747	-	menE	b2260	0.79	-0.3
2,372,747	-	menE	b2260	0.79	+0.0
2,372,812	-	menE	b2260	0.84	-0.8
2,372,885	-	menE	b2260	0.90	-0.3
2,372,903	+				+0.5
2,372,903	+				-0.1
2,372,986	+				-0.7
2,373,079	+				-2.1
2,373,079	+				-1.1
2,373,115	+				-0.0
2,373,146	-	menC	b2261	0.13	-1.4
2,373,146	-	menC	b2261	0.13	-0.1
2,373,146	-	menC	b2261	0.13	-1.2
2,373,241	-	menC	b2261	0.23	+0.2
2,373,255	+	menC	b2261	0.24	-0.2
2,373,493	-	menC	b2261	0.49	-0.8
2,373,493	-	menC	b2261	0.49	+0.6
2,373,550	-	menC	b2261	0.55	-2.1
2,373,559	+	menC	b2261	0.56	-0.3
2,373,559	+	menC	b2261	0.56	-1.8
2,373,733	+	menC	b2261	0.74	-1.3
2,373,733	+	menC	b2261	0.74	+0.3
2,373,743	-	menC	b2261	0.75	-0.3
2,373,743	-	menC	b2261	0.75	-0.9
2,373,925	+				-0.2
2,373,930	+				-0.6
2,373,930	+				-0.9